JASPAR - ATF2 - BP000713.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000713.1
Cell line/tissue:	HEK293
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR217HTK
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 24555

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.00	0.04	-0.00	-0.00	0.09	-0.00	0.00	0.00	0.01	0.09	-0.00	-0.00	0.00	-0.00	0.00	]
C [	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.02	0.00	0.00	0.07	0.00	0.00	0.01	0.00	0.00	-0.00	]
G [	-0.00	0.00	0.00	0.01	0.00	-0.00	0.08	0.00	-0.00	0.10	0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
T [	-0.00	0.00	0.00	-0.00	-0.00	0.08	0.00	-0.00	0.01	-0.00	0.09	-0.00	-0.00	0.05	0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	6928	6842	7050	7287	7237	7238	7282	7021	7059	7101	7405	6928	6993	7345	7796	8043	8443	8192	8464	7491	8150	16419	779	328	23516	464	334	144	4839	24273	284	4571	7772	6765	6471	7143	7030	6991	6854	7474	7086	7146	6872	7014	7057	7342	6806	6815	6954	7206	]
C [	4924	4978	5141	5137	4918	4905	4723	4919	4727	5102	5184	4928	4999	4998	4676	4001	4174	4157	4130	4666	3377	1796	716	549	165	5290	579	177	19379	14	4314	8546	5028	5041	4791	4368	4823	5022	4993	4834	5139	4916	5123	5115	5036	4877	5118	5383	5159	5043	]
G [	4982	5304	5316	4935	5286	5374	5187	5285	5343	5133	4855	5028	5164	5055	5298	5271	4471	4963	5270	5373	8735	5622	314	20768	478	4274	23597	9	193	159	1081	4017	4744	4340	4342	4798	4294	5305	5438	5146	5412	5504	5447	4931	5388	5120	5254	4993	5095	5264	]
T [	7721	7431	7048	7196	7114	7038	7363	7330	7426	7219	7111	7671	7399	7157	6785	7240	7467	7243	6691	7025	4293	718	22746	2910	396	14527	45	24225	144	109	18876	7421	7011	8409	8951	8246	8408	7237	7270	7101	6918	6989	7113	7495	7074	7216	7377	7364	7347	7042	]

Hypothetical CWM

A [	0.01	0.01	0.00	0.01	0.05	-0.05	-0.05	0.09	-0.07	0.02	-0.01	0.04	0.09	-0.05	0.00	0.01	0.00	0.00	]
C [	0.00	0.00	0.01	0.00	-0.01	0.02	-0.04	-0.05	0.12	0.00	-0.02	0.08	-0.07	0.03	0.03	0.01	0.01	0.00	]
G [	0.00	0.01	0.01	0.03	0.03	-0.07	0.08	-0.03	-0.01	0.10	-0.06	-0.04	0.02	-0.01	0.00	0.01	0.00	0.00	]
T [	0.00	0.00	0.01	-0.00	-0.04	0.08	0.03	-0.02	0.02	-0.06	0.10	-0.06	-0.05	0.06	0.01	-0.00	0.01	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1759

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1030

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 193

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 103

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000712.1	ATF2	ENCSR047BUZ	HepG2	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2