JASPAR - ATF2 - BP000712.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for ATF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ATF2
Model ID:	BP000712.1
Cell line/tissue:	HepG2
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1632.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P15336
Source:	ENCSR047BUZ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 16464

Contribution weight matrix (CWM)

A [	0.01	0.00	-0.00	0.00	0.08	-0.00	-0.00	0.15	-0.00	0.02	-0.00	0.01	0.13	-0.00	-0.00	0.00	0.00	0.00	]
C [	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.15	-0.01	0.00	0.11	-0.00	0.01	0.01	-0.00	-0.00	-0.00	]
G [	-0.00	-0.00	-0.00	0.01	0.01	0.00	0.12	-0.00	-0.00	0.00	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
T [	0.00	0.00	0.00	-0.00	-0.00	0.14	0.00	0.00	0.00	-0.00	0.15	-0.00	-0.00	0.07	0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	4670	4987	5408	4689	4563	4467	4611	5021	4811	5885	4889	5274	5406	5127	5493	12392	6	4	16418	5	10350	23	3093	16177	78	2706	4465	4805	5986	5471	4822	4339	4785	5476	5829	4860	5230	5675	5220	5133	4587	4733	4769	4785	5580	5940	5539	5265	5250	5106	]
C [	3433	3513	2854	3648	3634	4014	3516	3918	3814	2648	3852	3884	3700	2824	2730	245	62	1	1	15945	5884	38	13306	8	3916	5718	3087	3274	2937	2806	3931	3313	3071	3045	2922	2851	3044	3335	3671	3550	3621	3973	3499	3674	3212	2939	3399	3055	3104	3755	]
G [	3126	3043	3180	3621	3515	3288	2801	3071	2883	2760	2669	3189	2878	3213	4813	3785	0	16447	11	338	16	3	33	236	389	2529	2627	2303	2451	2515	2317	2709	3120	3101	3022	3357	3092	2802	2673	2817	2813	2842	3166	3178	2929	2904	2930	3493	3400	3036	]
T [	5235	4921	5022	4506	4752	4695	5536	4454	4956	5171	5054	4117	4480	5300	3428	42	16396	12	34	176	214	16400	32	43	12081	5511	6285	6082	5090	5672	5394	6103	5488	4842	4691	5396	5098	4652	4900	4964	5443	4916	5030	4827	4743	4681	4596	4651	4710	4567	]

Hypothetical CWM

A [	0.02	0.02	0.00	0.01	0.11	-0.08	-0.06	0.15	-0.09	0.04	-0.03	0.05	0.13	-0.08	-0.01	0.01	0.01	0.01	]
C [	-0.01	-0.01	0.01	-0.00	-0.05	0.03	-0.05	-0.10	0.16	-0.01	-0.04	0.13	-0.09	0.05	0.04	0.01	0.00	-0.00	]
G [	-0.00	0.00	0.01	0.05	0.04	-0.10	0.12	-0.05	0.01	0.18	-0.09	-0.05	0.03	-0.04	0.00	0.01	-0.01	-0.01	]
T [	0.00	0.01	0.02	-0.00	-0.08	0.14	0.07	-0.01	0.03	-0.11	0.15	-0.06	-0.06	0.10	0.02	0.00	0.01	0.02	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6807

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4960

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 464

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 389

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 139

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 127

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 65

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 63

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 42

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 37

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 26

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 23

CWM

PFM

HCWM

7 profiles found for the same TF (ATF2) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000709.1	ATF2	ENCSR000BQK	GM12878	Homo sapiens	MA1632.2
BP000710.1	ATF2	ENCSR000BQU	H1	Homo sapiens	MA1632.2
BP000711.1	ATF2	ENCSR014ARU	K562	Homo sapiens	MA1632.2
BP000713.1	ATF2	ENCSR217HTK	HEK293	Homo sapiens	MA1632.2
BP000714.1	ATF2	ENCSR869IUD	K562	Homo sapiens	MA1632.2
BP000715.1	ATF2	ENCSR908HWZ	HepG2	Homo sapiens	MA1632.2
BP000716.1	ATF2	ENCSR961PPA	GM12878	Homo sapiens	MA1632.2