Detailed information of deep learning profile BP000701.1

  1. Home
  2. Deep Learning Profile > BP000701.1
This page shows detailed deep learning-derived predictions and motifs for ELF1 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000701.1
Cell line/tissue: HCT116
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BVH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.06 0.07 -0.00 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.02 0.00 -0.00 -0.00 ]
T [ 0.00 -0.00 0.00 -0.00 0.00 0.05 0.05 0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 ]

Frequency matrix

       
A [ 973 990 987 977 1011 988 954 986 981 956 1011 987 1028 1072 1112 932 1061 873 519 569 2886 60 38 14 59 1 11 73 870 1077 715 680 858 898 923 939 957 971 988 997 1028 942 962 937 917 943 998 1026 989 1034 ]
C [ 1648 1685 1559 1607 1629 1579 1637 1743 1587 1608 1599 1604 1637 1676 1495 1775 1675 1482 2176 2568 399 4206 9 39 5059 5148 22 1175 1242 883 1364 2086 1599 1512 1586 1600 1531 1596 1495 1610 1573 1606 1587 1590 1564 1652 1635 1606 1577 1581 ]
G [ 1431 1417 1583 1520 1406 1509 1514 1389 1499 1505 1467 1514 1484 1406 1514 1475 1267 1651 1376 977 1257 312 14 48 29 1 3492 3553 1901 670 894 1317 1530 1619 1639 1528 1609 1493 1569 1439 1463 1495 1532 1486 1541 1470 1435 1480 1467 1470 ]
T [ 1098 1058 1021 1046 1104 1074 1045 1032 1083 1081 1073 1045 1001 996 1029 968 1147 1144 1079 1036 608 572 5089 5049 3 0 1625 349 1137 2520 2177 1067 1163 1121 1002 1083 1053 1090 1098 1104 1086 1107 1069 1137 1128 1085 1082 1038 1117 1065 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 0.02 -0.02 -0.00 -0.00 -0.01 -0.03 -0.04 -0.02 0.01 0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.01 0.02 -0.03 -0.02 0.06 0.07 -0.01 0.01 -0.00 -0.00 0.00 0.01 ]
G [ 0.01 0.01 0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.01 0.05 0.02 0.01 -0.01 -0.00 0.01 ]
T [ -0.00 -0.00 0.00 -0.01 0.01 0.05 0.05 -0.03 -0.04 0.01 -0.00 -0.01 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 404

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages