Detailed information of deep learning profile BP000697.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000697.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BMZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.00 -0.00 0.00 0.00 0.00 0.07 0.06 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.01 0.02 0.04 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 -0.00 0.09 0.07 0.00 -0.00 0.03 -0.00 0.01 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3493 3545 3581 3561 3547 3670 3546 3463 3630 3488 3513 3636 3601 3318 3454 3304 3517 3699 3733 6320 7236 3707 984 6864 0 2 16360 16188 2061 2011 3349 3469 3513 3590 3232 3238 3251 3204 3372 3519 3371 3461 3348 3349 3514 3466 3306 3431 3491 3470 ]
C [ 4689 4656 4742 4647 4785 4788 4684 4809 4637 4520 4656 4705 4602 4953 4828 5211 5160 4731 4346 3202 2522 6136 11968 9294 0 6 13 15 1131 4166 3201 4618 5173 4115 4563 4816 4445 4645 4824 4477 4793 4688 4484 4623 4564 4654 4798 4743 4612 4650 ]
G [ 4982 5017 5040 5081 5067 4890 5137 5047 4928 5078 5108 4967 5137 5037 4966 4875 4864 5134 6151 4376 3463 4122 3142 240 16417 16405 16 2 13122 1595 7794 6570 5066 5442 5544 5070 5262 5360 5081 5166 5142 5106 5325 5326 5170 5123 5171 5006 5155 5083 ]
T [ 3253 3199 3054 3128 3018 3069 3050 3098 3222 3331 3140 3109 3077 3109 3169 3027 2876 2853 2187 2519 3196 2452 323 19 0 4 28 212 103 8645 2073 1760 2665 3270 3078 3293 3459 3208 3140 3255 3111 3162 3260 3119 3169 3174 3142 3237 3159 3214 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.02 0.00 -0.00 0.01 -0.03 -0.03 0.07 0.06 0.01 -0.00 0.00 0.00 -0.00 ]
C [ 0.01 -0.00 -0.01 0.01 0.03 0.06 -0.03 -0.02 -0.02 -0.01 0.00 0.02 0.00 0.01 0.01 ]
G [ 0.01 0.00 -0.00 -0.00 0.01 -0.01 0.09 0.07 -0.03 -0.04 0.03 -0.01 0.02 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.01 -0.03 -0.05 -0.04 -0.02 -0.00 0.01 -0.03 0.03 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1015

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 914

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 141

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 57

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages