Detailed information of deep learning profile BP000698.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000698.1
Cell line/tissue: A549
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BPT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.05 0.07 0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.04 0.02 0.01 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.05 0.05 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 ]

Frequency matrix

       
A [ 1615 1607 1663 1651 1564 1587 1601 1549 1688 1578 1646 1752 1747 1614 1767 1404 975 1003 4581 86 113 31 14 1 7 107 1245 1703 1275 1196 1412 1449 1489 1567 1609 1531 1568 1617 1709 1554 1573 1553 1567 1532 1595 1601 1666 1677 1714 1550 ]
C [ 2614 2831 2799 2704 2782 2918 2755 2727 2746 2740 2675 2792 2556 2939 2883 2591 3493 4083 713 6773 8 50 8523 8558 54 2006 2225 1853 2359 3341 2776 2444 2772 2693 2617 2794 2658 2717 2597 2666 2689 2673 2590 2722 2715 2701 2695 2645 2546 2595 ]
G [ 2579 2530 2347 2493 2567 2375 2510 2642 2336 2551 2616 2385 2650 2415 2190 2871 2339 1797 2239 611 24 35 21 0 6064 5874 3185 1344 1697 2314 2598 2828 2697 2600 2707 2454 2588 2505 2502 2543 2657 2529 2588 2534 2500 2539 2441 2531 2490 2595 ]
T [ 1752 1592 1751 1712 1647 1680 1694 1642 1790 1691 1623 1631 1607 1592 1720 1694 1753 1677 1027 1090 8415 8444 2 1 2435 573 1905 3660 3229 1709 1774 1839 1602 1700 1627 1781 1746 1721 1752 1797 1641 1805 1815 1772 1750 1719 1758 1707 1810 1820 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 0.02 -0.02 0.00 -0.00 -0.01 -0.03 -0.05 -0.03 0.00 0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.01 0.02 -0.03 -0.02 0.05 0.07 -0.01 0.01 -0.00 -0.00 -0.00 0.01 ]
G [ 0.00 0.01 0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.01 0.05 0.02 0.01 -0.01 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.05 0.05 -0.03 -0.04 0.00 -0.01 -0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 534

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 239

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 195

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages