Detailed information of deep learning profile BP000695.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000695.1
Cell line/tissue: GM12878
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BMB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 0.06 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.00 0.02 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.07 0.06 0.00 -0.00 0.03 -0.00 0.01 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3244 3403 3282 3312 3274 3461 3252 3291 3443 3207 3283 3382 3318 3137 3295 3047 3087 3377 3423 5910 6855 4081 1074 6354 0 4 16535 16344 1713 1710 2896 3278 3168 3412 2870 2841 3008 3010 3026 3228 3177 3148 3122 3086 3274 3227 3101 3150 3104 3173 ]
C [ 5023 4917 4914 4901 5027 4983 4980 5082 4880 4860 4945 5018 4918 5314 5226 5388 5799 5252 4588 3460 2739 5405 11262 9859 0 0 4 10 1167 4724 3416 4750 5537 4346 4725 5132 4700 4820 5040 4781 4976 4899 4824 4940 4803 4766 5078 4976 4819 4863 ]
G [ 5320 5327 5420 5459 5445 5189 5492 5354 5267 5445 5387 5168 5511 5352 5160 5296 4937 5114 6450 5000 4146 4809 4065 336 16556 16551 4 1 13641 1665 8432 7006 5266 5710 6170 5385 5566 5736 5537 5507 5582 5589 5664 5635 5464 5502 5501 5348 5600 5522 ]
T [ 2969 2909 2940 2884 2810 2923 2832 2829 2966 3044 2941 2988 2809 2753 2875 2825 2733 2813 2095 2186 2816 2261 155 7 0 1 13 201 35 8457 1812 1522 2585 3088 2791 3198 3282 2990 2953 3040 2821 2920 2946 2895 3015 3061 2876 3082 3033 2998 ]

Hypothetical CWM

   
A [ -0.00 0.01 0.01 0.00 -0.01 0.01 -0.02 -0.02 0.06 0.05 0.00 -0.01 -0.00 -0.00 -0.00 0.00 ]
C [ 0.01 -0.00 -0.00 0.01 0.02 0.05 -0.02 -0.02 -0.02 -0.01 0.01 0.02 0.00 0.01 0.01 0.00 ]
G [ 0.01 0.00 0.00 0.00 0.02 -0.00 0.07 0.06 -0.03 -0.03 0.03 -0.01 0.02 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.03 -0.05 -0.04 -0.03 0.00 0.01 -0.03 0.02 -0.01 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 884

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 884

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages