Detailed information of deep learning profile BP000701.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000701.1
Cell line/tissue: HCT116
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BVH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 0.05 0.05 0.00 -0.00 0.00 -0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.02 0.03 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 0.00 -0.00 0.07 0.06 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1065 1117 1038 1082 1085 1128 1137 1069 1107 1086 1104 1098 1090 1053 1083 1002 1121 1163 1067 2177 2520 1137 349 1625 0 3 5049 5089 572 608 1036 1079 1144 1147 968 1029 996 1001 1045 1073 1081 1083 1032 1045 1074 1104 1046 1021 1058 1098 ]
C [ 1470 1467 1480 1435 1470 1541 1486 1532 1495 1463 1439 1569 1493 1609 1528 1639 1619 1530 1317 894 670 1901 3553 3492 1 29 48 14 312 1257 977 1376 1651 1267 1475 1514 1406 1484 1514 1467 1505 1499 1389 1514 1509 1406 1520 1583 1417 1431 ]
G [ 1581 1577 1606 1635 1652 1564 1590 1587 1606 1573 1610 1495 1596 1531 1600 1586 1512 1599 2086 1364 883 1242 1175 22 5148 5059 39 9 4206 399 2568 2176 1482 1675 1775 1495 1676 1637 1604 1599 1608 1587 1743 1637 1579 1629 1607 1559 1685 1648 ]
T [ 1034 989 1026 998 943 917 937 962 942 1028 997 988 971 957 939 923 898 858 680 715 1077 870 73 11 1 59 14 38 60 2886 569 519 873 1061 932 1112 1072 1028 987 1011 956 981 986 954 988 1011 977 987 990 973 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 -0.01 -0.00 0.01 -0.04 -0.03 0.05 0.05 0.01 -0.01 0.00 -0.00 -0.00 ]
C [ 0.01 -0.00 -0.01 0.01 0.02 0.05 -0.01 -0.02 -0.02 -0.01 -0.00 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.00 -0.00 -0.00 0.01 -0.01 0.07 0.06 -0.02 -0.03 0.02 -0.01 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.01 -0.02 -0.04 -0.03 -0.01 -0.00 -0.00 -0.02 0.02 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 404

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages