Detailed information of deep learning profile BP000700.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000700.1
Cell line/tissue: SK-N-SH
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BTA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.01 -0.00 0.00 0.04 0.06 -0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.01 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.04 0.04 0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 ]

Frequency matrix

       
A [ 1924 1948 1982 1960 1850 1892 1894 1869 1973 1890 1918 1987 2012 1948 2150 1731 1184 1243 5279 89 142 9 8 0 10 143 1782 2200 1569 1311 1641 1776 1774 1857 1855 1883 1862 1988 1970 1891 1901 1844 1868 1905 1933 1895 1918 1965 2032 1903 ]
C [ 3049 3168 3179 3154 3291 3339 3178 3173 3228 3146 3202 3210 3025 3363 3332 2950 4012 4661 893 7748 3 24 10032 10046 122 2239 2561 2042 2565 3885 3250 2821 3113 3029 3055 3178 3045 3158 3050 3141 3107 3095 3013 3109 3102 3110 3105 3100 2954 3045 ]
G [ 2990 2904 2797 2875 2880 2745 2909 2950 2721 2989 2908 2870 3078 2785 2512 3262 2605 2038 2610 743 16 13 6 0 6316 7027 3563 1426 1990 2630 2835 3158 3153 3072 3162 2941 3002 2847 2851 2851 2977 2993 3028 2940 2930 2934 2913 2928 2899 2960 ]
T [ 2083 2026 2088 2057 2025 2070 2065 2054 2124 2021 2018 1979 1931 1950 2052 2103 2245 2104 1264 1466 9885 10000 0 0 3598 637 2140 4378 3922 2220 2320 2291 2006 2088 1974 2044 2137 2053 2175 2163 2061 2114 2137 2092 2081 2107 2110 2053 2161 2138 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 0.01 -0.01 0.00 -0.01 -0.01 -0.03 -0.04 -0.02 0.01 0.01 0.00 -0.00 ]
C [ 0.00 0.01 0.01 -0.01 0.02 -0.03 -0.02 0.04 0.06 -0.00 0.01 -0.00 -0.00 -0.00 0.01 ]
G [ 0.01 0.00 0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.01 0.04 0.02 0.01 -0.01 -0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.01 0.04 0.04 -0.02 -0.03 0.01 -0.00 -0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 901

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 289

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 272

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 31

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages