Detailed information of deep learning profile BP000700.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000700.1
Cell line/tissue: SK-N-SH
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BTA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 0.04 0.04 0.00 -0.00 0.00 0.00 ]
C [ -0.00 -0.00 0.00 0.01 0.03 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 -0.00 0.06 0.04 0.00 -0.00 0.01 -0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 2138 2161 2053 2110 2107 2081 2092 2137 2114 2061 2163 2175 2053 2137 2044 1974 2088 2006 2291 2320 2220 3922 4378 2140 637 3598 0 0 10000 9885 1466 1264 2104 2245 2103 2052 1950 1931 1979 2018 2021 2124 2054 2065 2070 2025 2057 2088 2026 2083 ]
C [ 2960 2899 2928 2913 2934 2930 2940 3028 2993 2977 2851 2851 2847 3002 2941 3162 3072 3153 3158 2835 2630 1990 1426 3563 7027 6316 0 6 13 16 743 2610 2038 2605 3262 2512 2785 3078 2870 2908 2989 2721 2950 2909 2745 2880 2875 2797 2904 2990 ]
G [ 3045 2954 3100 3105 3110 3102 3109 3013 3095 3107 3141 3050 3158 3045 3178 3055 3029 3113 2821 3250 3885 2565 2042 2561 2239 122 10046 10032 24 3 7748 893 4661 4012 2950 3332 3363 3025 3210 3202 3146 3228 3173 3178 3339 3291 3154 3179 3168 3049 ]
T [ 1903 2032 1965 1918 1895 1933 1905 1868 1844 1901 1891 1970 1988 1862 1883 1855 1857 1774 1776 1641 1311 1569 2200 1782 143 10 0 8 9 142 89 5279 1243 1184 1731 2150 1948 2012 1987 1918 1890 1973 1869 1894 1892 1850 1960 1982 1948 1924 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 -0.00 -0.00 0.01 -0.03 -0.02 0.04 0.04 0.01 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 -0.00 -0.01 0.01 0.02 0.04 -0.01 -0.02 -0.02 -0.01 -0.00 0.01 0.00 0.00 0.01 ]
G [ 0.01 -0.00 -0.00 -0.00 0.01 -0.00 0.06 0.04 -0.02 -0.03 0.02 -0.01 0.01 0.01 0.00 ]
T [ -0.00 0.00 0.01 0.01 -0.02 -0.04 -0.03 -0.01 -0.01 0.00 -0.01 0.01 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 901

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 289

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 272

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 31

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000699.1 ELF1 ENCSR000BSS MCF-7 Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages