Detailed information of deep learning profile BP000699.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000699.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BSS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.06 0.07 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 0.02 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.05 0.05 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 ]

Frequency matrix

       
A [ 3029 2926 2958 2904 2941 2939 2851 2935 2898 2963 2983 2865 2890 3133 2977 2787 2989 2478 1661 1980 7660 111 201 30 6 4 18 226 2484 2992 2383 2134 2594 2541 2702 2924 2774 2787 2813 2831 3049 2885 2813 2799 2870 2811 2909 2811 2903 2938 ]
C [ 4820 4878 4571 4836 4811 4826 4903 5056 4911 4757 4875 4894 4959 4879 4647 5367 5089 4667 6096 7053 1548 12001 19 28 15234 15245 258 3110 3867 3314 4152 5837 4799 4653 4771 4675 4662 4835 4577 4768 4824 4781 4852 4771 4537 4814 4713 4871 4766 4753 ]
G [ 4250 4248 4593 4540 4280 4348 4417 4188 4316 4417 4200 4449 4383 4224 4637 4183 3891 4948 4415 3116 4065 1168 39 22 9 1 8656 10817 5734 2247 3055 4021 4625 4838 4754 4484 4761 4409 4520 4458 4206 4260 4459 4418 4501 4430 4360 4412 4383 4476 ]
T [ 3155 3202 3132 2974 3222 3141 3083 3075 3129 3117 3196 3046 3022 3018 2993 2917 3285 3161 3082 3105 1981 1974 14995 15174 5 4 6322 1101 3169 6701 5664 3262 3236 3222 3027 3171 3057 3223 3344 3197 3175 3328 3130 3266 3346 3199 3272 3160 3202 3087 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 -0.01 0.02 -0.03 -0.00 -0.00 -0.02 -0.04 -0.05 -0.03 0.00 0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 -0.01 0.03 -0.03 -0.03 0.06 0.07 -0.01 0.01 -0.00 -0.00 0.00 0.01 ]
G [ 0.00 0.01 0.01 0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.02 0.05 0.03 0.01 -0.01 -0.00 0.01 ]
T [ 0.00 -0.00 -0.00 0.00 -0.01 0.01 0.05 0.05 -0.03 -0.03 0.01 -0.00 0.00 0.01 0.01 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1746

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1033

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 640

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 213

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 99

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 26

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 23

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages