Detailed information of deep learning profile BP000699.1

  1. Home
  2. Deep Learning Profile > BP000699.1
This page shows detailed deep learning-derived predictions and motifs for ELF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000699.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BSS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.05 0.05 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 0.00 0.02 0.03 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.07 0.06 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3087 3202 3160 3272 3199 3346 3266 3130 3328 3175 3197 3344 3223 3057 3171 3027 3222 3236 3262 5664 6701 3169 1101 6322 4 5 15174 14995 1974 1981 3105 3082 3161 3285 2917 2993 3018 3022 3046 3196 3117 3129 3075 3083 3141 3222 2974 3132 3202 3155 ]
C [ 4476 4383 4412 4360 4430 4501 4418 4459 4260 4206 4458 4520 4409 4761 4484 4754 4838 4625 4021 3055 2247 5734 10817 8656 1 9 22 39 1168 4065 3116 4415 4948 3891 4183 4637 4224 4383 4449 4200 4417 4316 4188 4417 4348 4280 4540 4593 4248 4250 ]
G [ 4753 4766 4871 4713 4814 4537 4771 4852 4781 4824 4768 4577 4835 4662 4675 4771 4653 4799 5837 4152 3314 3867 3110 258 15245 15234 28 19 12001 1548 7053 6096 4667 5089 5367 4647 4879 4959 4894 4875 4757 4911 5056 4903 4826 4811 4836 4571 4878 4820 ]
T [ 2938 2903 2811 2909 2811 2870 2799 2813 2885 3049 2831 2813 2787 2774 2924 2702 2541 2594 2134 2383 2992 2484 226 18 4 6 30 201 111 7660 1980 1661 2478 2989 2787 2977 3133 2890 2865 2983 2963 2898 2935 2851 2939 2941 2904 2958 2926 3029 ]

Hypothetical CWM

   
A [ -0.00 0.01 0.01 0.00 -0.00 0.01 -0.03 -0.03 0.05 0.05 0.01 -0.01 0.00 -0.00 -0.00 0.00 ]
C [ 0.01 -0.00 -0.01 0.01 0.03 0.05 -0.02 -0.02 -0.02 -0.01 -0.00 0.01 0.00 0.01 0.01 0.00 ]
G [ 0.01 0.00 -0.00 -0.00 0.01 -0.01 0.07 0.06 -0.03 -0.03 0.03 -0.01 0.01 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.00 -0.03 -0.05 -0.04 -0.02 -0.00 -0.00 -0.03 0.02 -0.01 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1746

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1033

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 640

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 213

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 99

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 26

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 23

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000695.1 ELF1 ENCSR000BMB GM12878 Homo sapiens MA0473.4
BP000696.1 ELF1 ENCSR000BMD K562 Homo sapiens MA0473.4
BP000697.1 ELF1 ENCSR000BMZ HepG2 Homo sapiens MA0473.4
BP000698.1 ELF1 ENCSR000BPT A549 Homo sapiens MA0473.4
BP000700.1 ELF1 ENCSR000BTA SK-N-SH Homo sapiens MA0473.4
BP000701.1 ELF1 ENCSR000BVH HCT116 Homo sapiens MA0473.4
BP000702.1 ELF1 ENCSR321VGW HepG2 Homo sapiens MA0473.4
BP000703.1 ELF1 ENCSR475SOC MCF-7 Homo sapiens MA0473.4
BP000704.1 ELF1 ENCSR502NRF MCF-7 Homo sapiens MA0473.4
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
Showing 10 profiles of page 1 from 2 pages