Detailed information of deep learning profile BP000693.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000693.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR620DUQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.09 0.00 0.01 0.00 0.00 0.07 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.14 -0.00 0.00 0.08 -0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.09 0.00 -0.00 0.05 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.00 0.09 0.00 0.00 0.00 -0.00 0.08 -0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2533 2661 2797 2770 2687 2722 2667 2484 2491 2380 2609 2596 2369 2838 2675 2790 2628 1828 2182 5283 3 16 8969 0 5682 402 107 8881 440 2666 3476 2676 2584 2547 2462 2545 2635 2679 2778 2737 2621 2804 2416 2577 2524 2544 2652 2417 2599 2685 ]
C [ 2006 1881 1882 1849 1887 2033 1849 1987 2088 2150 1963 2058 1974 1798 1997 2054 2029 2241 1364 687 28 33 2 8991 1173 66 8773 10 3304 2812 1493 2012 1977 1974 2064 2110 1925 1921 1976 1859 2050 1923 1930 2041 2007 1979 1850 2058 2075 1930 ]
G [ 2010 1980 2003 1957 1915 1835 1885 1963 1789 1856 1817 1808 2175 1984 1918 1879 1846 1433 2658 2899 1 8834 10 5 2113 68 106 68 1028 1230 2131 1867 1814 1845 1766 1808 1893 1839 1916 1814 1841 1771 1919 1789 1922 1841 1964 1975 1900 1909 ]
T [ 2455 2482 2322 2428 2515 2414 2603 2570 2636 2618 2615 2542 2486 2384 2414 2281 2501 3502 2800 135 8972 121 23 8 36 8468 18 45 4232 2296 1904 2449 2629 2638 2712 2541 2551 2565 2334 2594 2492 2506 2739 2597 2551 2640 2538 2554 2430 2480 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.01 0.04 -0.07 -0.05 0.09 -0.10 0.01 -0.02 -0.00 0.07 -0.04 0.01 0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.01 -0.02 -0.08 0.14 -0.03 -0.03 0.08 -0.05 0.03 0.02 0.00 0.01 0.01 ]
G [ 0.00 0.01 0.00 0.02 0.03 -0.06 0.09 -0.05 -0.03 0.13 -0.07 -0.01 0.00 -0.01 0.00 0.01 0.00 0.00 ]
T [ 0.00 -0.00 0.01 0.01 -0.05 0.09 -0.01 -0.01 0.01 -0.10 0.08 -0.05 -0.06 0.03 -0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 7792

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5816

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 4226

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 786

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 560

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 220

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 214

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 183

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 129

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 48

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 42

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 27

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages