Detailed information of deep learning profile BP000685.1

  1. Home
  2. Deep Learning Profile > BP000685.1
This page shows detailed deep learning-derived predictions and motifs for CREB1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000685.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BSO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.04 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 323 353 339 317 305 326 344 321 308 310 284 290 340 303 327 328 298 223 315 607 5 7 1289 0 931 13 54 1293 53 409 396 320 262 323 288 269 309 316 347 327 348 335 315 302 332 320 346 329 346 353 ]
C [ 330 362 374 351 369 380 348 313 371 383 380 409 404 383 367 348 367 486 233 200 24 18 3 1320 328 6 1255 8 471 424 270 423 380 354 392 347 370 366 373 374 365 352 361 399 371 361 364 392 339 315 ]
G [ 358 310 325 353 336 315 332 337 336 329 332 322 318 319 344 384 397 230 375 489 5 1188 9 6 5 10 10 20 192 199 410 292 341 340 357 359 349 353 310 362 294 335 307 321 302 310 306 299 332 334 ]
T [ 321 307 294 311 322 311 308 361 317 310 336 311 270 327 294 272 270 393 409 36 1298 119 31 6 68 1303 13 11 616 300 256 297 349 315 295 357 304 297 302 269 325 310 349 310 327 341 316 312 315 330 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.01 0.03 -0.03 0.00 -0.01 0.01 0.03 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.02 -0.01 -0.02 0.04 -0.01 0.00 0.03 -0.02 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.01 -0.02 0.03 -0.00 -0.01 0.05 -0.01 -0.01 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.03 0.01 -0.00 0.00 -0.03 0.03 -0.01 -0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6734

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3572

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 905

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 767

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 642

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 592

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 237

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 116

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages