Detailed information of deep learning profile BP000689.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000689.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR112ALD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 0.07 -0.00 0.00 0.01 -0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.07 -0.00 0.01 0.01 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.06 0.00 -0.00 0.10 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.00 0.06 0.00 0.00 0.01 0.00 0.07 -0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1830 1837 1895 1953 2009 1985 1946 2101 1773 1893 1775 1704 1933 1906 1876 2027 1953 1994 1835 1227 1538 3480 6 12 6413 30 6 9 102 6576 52 2282 2754 1867 1621 1801 1802 1870 1801 1976 1962 2062 1911 1953 1823 1795 1777 1750 1896 1872 ]
C [ 1407 1336 1359 1309 1290 1287 1322 1294 1338 1248 1391 1465 1196 1286 1231 1273 1313 1312 1299 1560 754 295 9 52 17 11 6 9 6464 1 2228 2040 911 1341 1329 1396 1350 1488 1326 1301 1307 1212 1323 1290 1308 1419 1404 1406 1369 1487 ]
G [ 1305 1454 1559 1358 1438 1379 1439 1354 1437 1461 1286 1418 1390 1442 1602 1410 1381 1481 1513 1020 2129 2702 1 6346 43 886 6571 0 15 5 243 864 1783 1463 1447 1492 1306 1394 1503 1420 1535 1533 1387 1368 1414 1284 1309 1335 1364 1430 ]
T [ 2041 1956 1770 1963 1846 1932 1876 1834 2035 1981 2131 1996 2064 1949 1874 1873 1936 1796 1936 2776 2162 106 6567 173 110 5656 0 6565 2 1 4060 1397 1135 1912 2186 1894 2125 1831 1953 1886 1779 1776 1962 1972 2038 2085 2093 2092 1954 1794 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.01 0.03 -0.05 -0.04 0.06 -0.08 0.01 -0.00 -0.00 0.07 -0.04 0.01 0.01 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.00 -0.01 -0.05 0.11 -0.02 -0.04 0.07 -0.05 0.03 0.02 -0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.03 -0.04 0.06 -0.02 -0.03 0.10 -0.06 -0.02 0.02 -0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.01 0.00 -0.04 0.06 0.00 -0.01 0.01 -0.07 0.07 -0.04 -0.06 0.03 -0.01 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 13919

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3960

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2737

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 612

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 338

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 190

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 184

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 29

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages