Detailed information of deep learning profile BP000690.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000690.1
Cell line/tissue: GM23338
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR214ZAV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.05 -0.00 0.00 0.03 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 331 310 298 300 319 300 332 314 302 306 334 312 320 270 246 278 296 307 392 358 286 227 307 639 9 5 1335 0 1056 18 23 1306 28 398 422 332 283 338 317 260 310 341 314 338 321 344 299 292 321 368 ]
C [ 376 376 366 393 382 414 362 357 362 389 371 400 373 373 416 428 430 394 347 310 395 433 213 206 15 6 0 1344 266 9 1292 19 612 497 264 419 387 379 403 380 383 360 362 373 419 345 362 395 374 355 ]
G [ 339 360 340 377 319 317 365 372 331 358 337 338 342 380 350 355 359 341 321 403 386 244 502 455 2 1240 1 4 3 2 4 14 175 171 434 312 371 328 341 383 342 393 382 361 326 328 321 348 326 327 ]
T [ 302 302 344 278 328 317 289 305 353 295 306 298 313 325 336 287 263 306 288 277 281 444 326 48 1322 97 12 0 23 1319 29 9 533 282 228 285 307 303 287 325 313 254 290 276 282 331 366 313 327 298 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.03 -0.03 0.00 -0.01 0.00 0.03 -0.01 0.00 0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 0.01 -0.01 -0.02 0.05 -0.02 -0.00 0.03 -0.01 0.02 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.02 0.03 -0.00 -0.01 0.06 -0.01 -0.01 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.01 0.00 -0.01 0.03 0.01 -0.00 -0.00 -0.04 0.03 -0.01 -0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6155

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 954

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 747

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 701

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 503

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 500

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 323

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 82

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages