Detailed information of deep learning profile BP000693.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000693.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR620DUQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.08 -0.00 0.00 0.00 0.00 0.09 -0.00 0.00 0.01 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.05 -0.00 0.00 0.09 -0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.08 0.00 -0.00 0.14 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.07 0.00 0.00 0.01 0.00 0.09 -0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2480 2430 2554 2538 2640 2551 2597 2739 2506 2492 2594 2334 2565 2551 2541 2712 2638 2629 2449 1904 2296 4232 45 18 8468 36 8 23 121 8972 135 2800 3502 2501 2281 2414 2384 2486 2542 2615 2618 2636 2570 2603 2414 2515 2428 2322 2482 2455 ]
C [ 1909 1900 1975 1964 1841 1922 1789 1919 1771 1841 1814 1916 1839 1893 1808 1766 1845 1814 1867 2131 1230 1028 68 106 68 2113 5 10 8834 1 2899 2658 1433 1846 1879 1918 1984 2175 1808 1817 1856 1789 1963 1885 1835 1915 1957 2003 1980 2010 ]
G [ 1930 2075 2058 1850 1979 2007 2041 1930 1923 2050 1859 1976 1921 1925 2110 2064 1974 1977 2012 1493 2812 3304 10 8773 66 1173 8991 2 33 28 687 1364 2241 2029 2054 1997 1798 1974 2058 1963 2150 2088 1987 1849 2033 1887 1849 1882 1881 2006 ]
T [ 2685 2599 2417 2652 2544 2524 2577 2416 2804 2621 2737 2778 2679 2635 2545 2462 2547 2584 2676 3476 2666 440 8881 107 402 5682 0 8969 16 3 5283 2182 1828 2628 2790 2675 2838 2369 2596 2609 2380 2491 2484 2667 2722 2687 2770 2797 2661 2533 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.03 -0.06 -0.05 0.08 -0.10 0.01 -0.01 -0.01 0.09 -0.05 0.01 0.01 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.00 -0.01 -0.07 0.13 -0.03 -0.05 0.09 -0.06 0.03 0.02 0.00 0.01 0.00 ]
G [ 0.01 0.01 0.00 0.02 0.03 -0.05 0.08 -0.03 -0.03 0.14 -0.08 -0.02 0.01 -0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.01 0.01 -0.04 0.07 -0.00 -0.02 0.01 -0.10 0.09 -0.05 -0.07 0.04 -0.01 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 7792

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5816

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 4226

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 786

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 560

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 220

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 214

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 183

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 129

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 101

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 48

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 42

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 27

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages