Detailed information of deep learning profile BP000692.1

  1. Home
  2. Deep Learning Profile > BP000692.1
This page shows detailed deep learning-derived predictions and motifs for CREB1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000692.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR471WXT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.04 -0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 262 280 232 267 264 285 288 266 271 243 243 280 256 278 278 250 189 229 464 9 8 1043 0 763 23 50 1046 41 346 321 273 224 248 235 205 266 297 285 260 266 250 253 253 270 263 279 289 285 294 272 ]
C [ 297 309 301 301 303 283 259 303 293 312 332 308 323 274 267 292 371 196 176 20 8 1 1069 235 12 1011 6 394 313 231 357 318 267 314 280 291 274 263 311 293 270 296 319 285 267 278 276 267 254 300 ]
G [ 257 246 290 291 257 268 264 272 278 272 258 272 235 303 312 306 185 317 403 4 976 4 5 8 6 15 13 144 187 332 226 260 282 318 292 269 271 305 281 261 307 266 269 242 285 253 267 255 255 300 ]
T [ 266 247 259 223 258 246 271 241 240 255 249 222 268 227 225 234 337 340 39 1049 90 34 8 76 1041 6 17 503 236 198 226 280 285 215 305 256 240 229 230 262 255 267 241 285 267 272 250 275 279 210 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.01 0.03 -0.02 0.00 -0.01 0.01 0.02 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.02 -0.01 -0.02 0.04 -0.02 -0.00 0.02 -0.01 0.01 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.01 -0.02 0.03 -0.00 -0.01 0.05 -0.01 -0.01 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.01 0.02 0.01 -0.00 -0.00 -0.03 0.03 -0.01 -0.01 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4346

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 947

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 793

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 633

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 537

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 433

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 22

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages