Detailed information of deep learning profile BP000692.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000692.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR471WXT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 -0.00 0.04 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 210 279 275 250 272 267 285 241 267 255 262 230 229 240 256 305 215 285 280 226 198 236 503 17 6 1041 76 8 34 90 1049 39 340 337 234 225 227 268 222 249 255 240 241 271 246 258 223 259 247 266 ]
C [ 300 255 255 267 253 285 242 269 266 307 261 281 305 271 269 292 318 282 260 226 332 187 144 13 15 6 8 5 4 976 4 403 317 185 306 312 303 235 272 258 272 278 272 264 268 257 291 290 246 257 ]
G [ 300 254 267 276 278 267 285 319 296 270 293 311 263 274 291 280 314 267 318 357 231 313 394 6 1011 12 235 1069 1 8 20 176 196 371 292 267 274 323 308 332 312 293 303 259 283 303 301 301 309 297 ]
T [ 272 294 285 289 279 263 270 253 253 250 266 260 285 297 266 205 235 248 224 273 321 346 41 1046 50 23 763 0 1043 8 9 464 229 189 250 278 278 256 280 243 243 271 266 288 285 264 267 232 280 262 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.01 -0.01 0.03 -0.03 -0.00 -0.00 0.01 0.02 -0.01 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.01 -0.01 -0.01 0.05 -0.01 -0.00 0.03 -0.02 0.01 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.01 -0.01 0.02 -0.00 -0.02 0.04 -0.02 -0.01 0.02 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.02 0.01 -0.01 0.00 -0.02 0.03 -0.01 -0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4346

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 947

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 793

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 633

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 537

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 433

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 22

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages