Detailed information of deep learning profile BP000686.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000686.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BUF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.04 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1328 1319 1312 1348 1316 1321 1307 1394 1408 1357 1346 1261 1332 1311 1339 1352 1452 1377 1143 1249 2204 176 160 4206 11 3008 231 153 4669 276 1552 1450 1110 1112 1256 1246 1189 1306 1312 1305 1334 1340 1356 1344 1366 1356 1385 1366 1315 1378 ]
C [ 1068 1037 1069 1095 1080 1129 1155 1094 1100 1131 1054 1080 1016 1127 1059 1088 1081 1074 1331 818 895 215 125 10 4396 1371 42 4595 18 1368 1308 853 1247 1182 1056 1169 1248 1221 1081 1075 1077 1057 1055 1108 1076 1094 1028 1069 1119 1127 ]
G [ 1046 1123 1047 1097 1086 1067 1010 1011 1026 1043 1079 1083 1073 1113 1100 1046 1077 1138 899 1194 1226 39 3297 306 214 19 89 22 34 633 588 1317 1047 1083 1069 1103 1054 920 1044 1087 1047 1055 1105 1018 1049 1011 1011 1058 1060 1007 ]
T [ 1344 1307 1358 1246 1304 1269 1314 1287 1252 1255 1307 1362 1365 1235 1288 1300 1176 1197 1413 1525 461 4356 1204 264 165 388 4424 16 65 2509 1338 1166 1382 1409 1405 1268 1295 1339 1349 1319 1328 1334 1270 1316 1295 1325 1362 1293 1292 1274 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.01 -0.02 -0.02 0.03 -0.02 -0.00 -0.01 0.01 0.03 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 0.01 -0.02 -0.02 0.04 -0.01 -0.00 0.03 -0.02 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.02 0.03 -0.00 -0.00 0.05 -0.01 -0.02 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.03 0.01 -0.01 -0.00 -0.03 0.03 -0.02 -0.02 0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8857

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3942

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1370

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 986

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 877

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 673

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 413

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 377

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 131

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 82

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 39

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 23

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages