Detailed information of deep learning profile BP000686.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000686.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BUF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.00 0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.04 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1274 1292 1293 1362 1325 1295 1316 1270 1334 1328 1319 1349 1339 1295 1268 1405 1409 1382 1166 1338 2509 65 16 4424 388 165 264 1204 4356 461 1525 1413 1197 1176 1300 1288 1235 1365 1362 1307 1255 1252 1287 1314 1269 1304 1246 1358 1307 1344 ]
C [ 1007 1060 1058 1011 1011 1049 1018 1105 1055 1047 1087 1044 920 1054 1103 1069 1083 1047 1317 588 633 34 22 89 19 214 306 3297 39 1226 1194 899 1138 1077 1046 1100 1113 1073 1083 1079 1043 1026 1011 1010 1067 1086 1097 1047 1123 1046 ]
G [ 1127 1119 1069 1028 1094 1076 1108 1055 1057 1077 1075 1081 1221 1248 1169 1056 1182 1247 853 1308 1368 18 4595 42 1371 4396 10 125 215 895 818 1331 1074 1081 1088 1059 1127 1016 1080 1054 1131 1100 1094 1155 1129 1080 1095 1069 1037 1068 ]
T [ 1378 1315 1366 1385 1356 1366 1344 1356 1340 1334 1305 1312 1306 1189 1246 1256 1112 1110 1450 1552 276 4669 153 231 3008 11 4206 160 176 2204 1249 1143 1377 1452 1352 1339 1311 1332 1261 1346 1357 1408 1394 1307 1321 1316 1348 1312 1319 1328 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.01 -0.02 -0.02 0.03 -0.03 -0.00 -0.01 0.01 0.03 -0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.01 -0.02 -0.01 0.05 -0.00 -0.00 0.03 -0.02 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.02 0.03 -0.00 -0.01 0.04 -0.02 -0.02 0.01 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.03 0.01 -0.01 -0.00 -0.02 0.03 -0.02 -0.02 0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8857

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3942

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1370

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 986

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 877

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 673

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 413

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 377

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 131

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 82

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 39

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 23

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages