Detailed information of deep learning profile BP000684.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000684.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BSN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.04 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.04 0.00 -0.00 0.06 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 0.04 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 287 321 327 284 312 321 290 282 257 254 277 314 260 293 293 247 245 304 582 1 7 1318 56 1 45 93 1309 57 376 375 279 264 294 270 253 281 324 322 286 289 301 304 335 307 291 299 300 285 310 284 ]
C [ 369 331 330 359 356 341 339 356 367 405 414 431 386 361 358 319 439 207 172 21 3 10 2 4 14 1244 6 486 441 290 402 458 350 363 385 353 380 377 371 372 378 361 329 354 360 336 361 379 350 373 ]
G [ 400 396 400 407 401 379 435 407 399 388 409 371 421 382 428 488 278 508 564 6 1318 9 338 1352 4 11 34 234 227 480 403 328 369 447 446 433 410 370 399 381 359 422 405 407 404 416 378 393 396 406 ]
T [ 301 309 300 307 288 316 293 312 334 310 257 241 290 321 278 303 395 338 39 1329 29 20 961 0 1294 9 8 580 313 212 273 307 344 277 273 290 243 288 301 315 319 270 288 289 302 306 318 300 301 294 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 0.00 0.02 -0.02 -0.02 0.04 -0.04 -0.00 -0.01 0.01 0.03 -0.01 0.00 0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.02 -0.02 -0.01 0.08 -0.01 -0.00 0.04 -0.02 0.02 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.02 -0.02 0.04 -0.00 -0.02 0.06 -0.02 -0.02 0.03 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.02 0.03 0.01 -0.01 -0.00 -0.04 0.04 -0.02 -0.02 0.02 0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2388

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1075

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 882

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 690

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 261

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 114

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages