Detailed information of deep learning profile BP000684.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000684.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BSN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.04 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.06 -0.00 0.00 0.04 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.04 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 0.04 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 294 301 300 318 306 302 289 288 270 319 315 301 288 243 290 273 277 344 307 273 212 313 580 8 9 1294 0 961 20 29 1329 39 338 395 303 278 321 290 241 257 310 334 312 293 316 288 307 300 309 301 ]
C [ 406 396 393 378 416 404 407 405 422 359 381 399 370 410 433 446 447 369 328 403 480 227 234 34 11 4 1352 338 9 1318 6 564 508 278 488 428 382 421 371 409 388 399 407 435 379 401 407 400 396 400 ]
G [ 373 350 379 361 336 360 354 329 361 378 372 371 377 380 353 385 363 350 458 402 290 441 486 6 1244 14 4 2 10 3 21 172 207 439 319 358 361 386 431 414 405 367 356 339 341 356 359 330 331 369 ]
T [ 284 310 285 300 299 291 307 335 304 301 289 286 322 324 281 253 270 294 264 279 375 376 57 1309 93 45 1 56 1318 7 1 582 304 245 247 293 293 260 314 277 254 257 282 290 321 312 284 327 321 287 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 0.00 0.02 -0.02 -0.02 0.04 -0.04 -0.00 -0.01 0.01 0.03 -0.02 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.03 -0.02 -0.02 0.06 -0.02 -0.00 0.04 -0.02 0.02 0.01 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.02 -0.02 0.04 -0.00 -0.01 0.08 -0.01 -0.02 0.02 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.01 0.00 -0.01 0.03 0.01 -0.01 -0.00 -0.04 0.04 -0.02 -0.02 0.02 0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2388

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1075

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 882

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 690

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 261

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 114

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages