Detailed information of deep learning profile BP000681.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000681.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BRA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 -0.00 0.08 -0.00 0.00 0.03 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.01 0.01 -0.00 0.08 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.02 0.01 -0.00 -0.00 0.00 0.05 -0.00 -0.00 0.01 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 519 464 459 484 492 439 456 447 471 446 450 454 382 524 543 384 239 1493 14 19 44 189 2586 174 482 674 476 388 458 473 346 369 368 470 420 437 485 508 483 481 503 503 537 471 510 455 449 514 484 511 ]
C [ 808 893 874 866 846 995 886 982 918 947 915 957 1078 731 897 560 362 81 2633 3 99 2448 11 1277 960 552 1083 1120 718 908 776 1166 802 1007 1096 823 882 889 834 874 890 834 838 847 855 906 861 808 892 841 ]
G [ 878 865 880 953 863 837 916 851 881 807 892 868 735 862 821 423 1167 1006 4 2689 20 42 103 455 485 884 776 754 1042 946 1181 747 1146 792 783 974 863 804 866 837 829 860 794 871 909 851 893 879 837 864 ]
T [ 506 489 498 408 510 440 453 431 441 511 454 432 516 594 450 1344 943 131 60 0 2548 32 11 805 784 601 376 449 493 384 408 429 395 442 412 477 481 510 528 519 489 514 542 522 437 499 508 510 498 495 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 -0.01 -0.02 0.04 -0.04 -0.01 -0.02 0.02 0.04 -0.01 -0.00 0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 0.00 -0.02 -0.03 0.08 -0.05 0.00 0.03 -0.03 0.01 0.00 -0.00 0.01 ]
G [ 0.00 0.00 0.01 -0.01 0.02 0.02 -0.05 0.08 -0.03 -0.03 0.02 -0.01 -0.00 0.01 0.00 ]
T [ -0.00 0.00 -0.01 0.02 0.02 -0.02 -0.01 -0.04 0.05 -0.02 -0.03 0.02 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 146

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages