Detailed information of deep learning profile BP000681.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000681.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BRA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.01 -0.00 -0.00 0.05 0.00 -0.00 -0.00 0.01 0.02 -0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.08 -0.00 0.01 0.01 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.03 0.00 -0.00 0.08 -0.00 -0.00 -0.00 -0.00 -0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.04 0.00 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 495 498 510 508 499 437 522 542 514 489 519 528 510 481 477 412 442 395 429 408 384 493 449 376 601 784 805 11 32 2548 0 60 131 943 1344 450 594 516 432 454 511 441 431 453 440 510 408 498 489 506 ]
C [ 864 837 879 893 851 909 871 794 860 829 837 866 804 863 974 783 792 1146 747 1181 946 1042 754 776 884 485 455 103 42 20 2689 4 1006 1167 423 821 862 735 868 892 807 881 851 916 837 863 953 880 865 878 ]
G [ 841 892 808 861 906 855 847 838 834 890 874 834 889 882 823 1096 1007 802 1166 776 908 718 1120 1083 552 960 1277 11 2448 99 3 2633 81 362 560 897 731 1078 957 915 947 918 982 886 995 846 866 874 893 808 ]
T [ 511 484 514 449 455 510 471 537 503 503 481 483 508 485 437 420 470 368 369 346 473 458 388 476 674 482 174 2586 189 44 19 14 1493 239 384 543 524 382 454 450 446 471 447 456 439 492 484 459 464 519 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.02 -0.03 -0.02 0.05 -0.04 -0.01 -0.02 0.02 0.02 -0.01 0.00 -0.00 ]
C [ 0.00 0.01 -0.00 -0.01 0.02 -0.03 -0.03 0.08 -0.05 0.02 0.02 -0.01 0.01 0.00 0.00 ]
G [ 0.01 -0.00 0.00 0.01 -0.03 0.03 0.00 -0.05 0.08 -0.03 -0.02 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.01 0.04 0.02 -0.02 -0.01 -0.04 0.04 -0.02 -0.01 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 146

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages