JASPAR - JUND - BP000675.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for JUND in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	JUND
Model ID:	BP000675.1
Cell line/tissue:	liver
Class:	Basic leucine zipper factors (bZIP)
Family:	Jun-related
JASPAR ID:	MA1141.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17535
Source:	ENCSR837GTK
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 6119

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.00	0.01	-0.00	-0.00	0.07	-0.00	-0.00	0.00	0.07	0.00	-0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	-0.00	0.00	0.00	-0.00	0.03	-0.00	0.06	-0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.01	0.00	-0.00	0.07	-0.00	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	0.08	0.00	-0.00	-0.00	0.05	-0.00	-0.00	0.01	0.00	-0.00	0.00	]

Frequency matrix

A [	1661	1601	1614	1608	1757	1635	1609	1539	1567	1608	1726	1484	1513	1522	1482	1386	1888	1897	1900	1320	1617	3007	1	1	6112	176	77	195	6082	192	1421	1274	1312	1212	1220	1462	1574	1938	1585	1755	1513	1491	1673	1596	1551	1816	1526	1619	1547	1596	]
C [	1463	1475	1409	1413	1425	1397	1429	1451	1490	1561	1364	1354	1655	1575	1448	1338	1404	1536	1332	1740	851	855	4	0	3	5690	31	5892	6	1771	1911	2058	1840	1427	1405	1733	1706	1303	1529	1526	1507	1651	1409	1421	1702	1422	1624	1342	1379	1385	]
G [	1372	1396	1504	1524	1377	1478	1425	1477	1399	1428	1495	1592	1408	1351	1704	1882	1550	1410	1579	1480	2288	2108	1	6047	1	15	27	8	19	1119	1015	1332	1116	1214	1569	1242	1441	1349	1269	1315	1413	1384	1440	1516	1358	1338	1431	1362	1391	1367	]
T [	1623	1647	1592	1574	1560	1609	1656	1652	1663	1522	1534	1689	1543	1671	1485	1513	1277	1276	1308	1579	1363	149	6113	71	3	238	5984	24	12	3037	1772	1455	1851	2266	1925	1682	1398	1529	1736	1523	1686	1593	1597	1586	1508	1543	1538	1796	1802	1771	]

Hypothetical CWM

A [	0.01	0.00	-0.00	0.01	0.02	-0.03	-0.02	0.07	-0.01	-0.00	0.03	0.07	-0.01	0.00	0.00	0.00	-0.00	]
C [	0.01	0.01	0.02	0.00	0.00	-0.00	-0.04	-0.01	0.03	-0.02	0.06	-0.03	0.02	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.02	0.02	-0.03	0.07	-0.01	0.05	0.00	-0.04	-0.00	0.01	0.01	0.02	0.01	0.01	]
T [	-0.00	0.00	0.00	0.00	-0.01	0.08	0.03	-0.01	-0.01	0.05	-0.02	-0.03	0.02	0.01	-0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7302

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5470

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1766

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1481

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1255

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 833

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 35

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 34

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 27

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000668.1	JUND	ENCSR000EDH	HeLa-S3	Homo sapiens	MA1141.2
BP000669.1	JUND	ENCSR000EEI	HepG2	Homo sapiens	MA1141.2
BP000670.1	JUND	ENCSR000EGN	K562	Homo sapiens	MA1141.2
BP000671.1	JUND	ENCSR000EIB	SK-N-SH	Homo sapiens	MA1141.2
BP000672.1	JUND	ENCSR000EYV	GM12878	Homo sapiens	MA0491.3
BP000673.1	JUND	ENCSR196HGZ	liver	Homo sapiens	MA1141.2
BP000674.1	JUND	ENCSR282ZLP	HepG2	Homo sapiens	MA1141.2