Detailed information of deep learning profile BP000675.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000675.1
Cell line/tissue: liver
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR837GTK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.05 -0.00 -0.00 0.00 0.08 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.07 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.06 -0.00 0.03 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.07 0.00 -0.00 -0.00 0.07 -0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1771 1802 1796 1538 1543 1508 1586 1597 1593 1686 1523 1736 1529 1398 1682 1925 2266 1851 1455 1772 3037 12 24 5984 238 3 71 6113 149 1363 1579 1308 1276 1277 1513 1485 1671 1543 1689 1534 1522 1663 1652 1656 1609 1560 1574 1592 1647 1623 ]
C [ 1367 1391 1362 1431 1338 1358 1516 1440 1384 1413 1315 1269 1349 1441 1242 1569 1214 1116 1332 1015 1119 19 8 27 15 1 6047 1 2108 2288 1480 1579 1410 1550 1882 1704 1351 1408 1592 1495 1428 1399 1477 1425 1478 1377 1524 1504 1396 1372 ]
G [ 1385 1379 1342 1624 1422 1702 1421 1409 1651 1507 1526 1529 1303 1706 1733 1405 1427 1840 2058 1911 1771 6 5892 31 5690 3 0 4 855 851 1740 1332 1536 1404 1338 1448 1575 1655 1354 1364 1561 1490 1451 1429 1397 1425 1413 1409 1475 1463 ]
T [ 1596 1547 1619 1526 1816 1551 1596 1673 1491 1513 1755 1585 1938 1574 1462 1220 1212 1312 1274 1421 192 6082 195 77 176 6112 1 1 3007 1617 1320 1900 1897 1888 1386 1482 1522 1513 1484 1726 1608 1567 1539 1609 1635 1757 1608 1614 1601 1661 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.01 0.02 -0.03 -0.02 0.05 -0.01 -0.01 0.03 0.08 -0.01 0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.01 0.01 -0.00 -0.04 0.00 0.05 -0.01 0.07 -0.03 0.02 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.03 0.06 -0.02 0.03 -0.01 -0.04 -0.00 0.00 0.00 0.02 0.01 0.01 ]
T [ -0.00 0.00 0.00 0.00 -0.01 0.07 0.03 -0.00 -0.01 0.07 -0.02 -0.03 0.02 0.01 -0.00 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7302

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5470

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1766

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1481

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 833

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 35

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 27

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 23

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages