Detailed information of deep learning profile BP000615.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000615.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DMP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.05 0.00 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 734 794 804 756 765 842 731 768 745 750 788 760 773 934 1133 625 29 3992 1 7 447 29 309 611 715 653 622 757 719 748 750 766 757 776 729 783 713 810 785 784 727 798 737 777 747 762 735 714 768 757 ]
C [ 1360 1358 1362 1372 1392 1351 1484 1404 1364 1455 1390 1374 1398 1141 1086 1308 4181 34 4222 3 1286 120 628 1748 1488 1333 1511 1325 1402 1403 1277 1305 1358 1351 1433 1335 1364 1385 1327 1329 1404 1283 1381 1382 1349 1378 1358 1389 1387 1391 ]
G [ 1386 1425 1318 1427 1340 1362 1306 1353 1428 1334 1363 1425 1392 1600 1360 1962 33 203 6 4267 23 3824 2832 917 1205 1488 1329 1510 1480 1401 1464 1460 1407 1434 1350 1397 1383 1348 1375 1374 1400 1368 1391 1353 1396 1339 1409 1359 1316 1286 ]
T [ 797 700 793 722 780 722 756 752 740 738 736 718 714 602 698 382 34 48 48 0 2521 304 508 1001 869 803 815 685 676 725 786 746 755 716 765 762 817 734 790 790 746 828 768 765 785 798 775 815 806 843 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.05 0.01 -0.00 -0.03 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.00 0.04 -0.04 0.05 -0.03 0.02 -0.02 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 -0.03 0.02 -0.03 0.05 -0.04 0.04 0.01 -0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.03 -0.01 0.01 -0.05 0.02 0.00 0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1644

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 166

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages