Detailed information of deep learning profile BP001139.1

This page shows detailed deep learning-derived predictions and motifs for SREBF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SREBF1
Model ID: BP001139.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0829.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36956  
Source: ENCSR815ZDS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 -0.00 0.01 0.00 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 -0.00 0.00 ]
G [ -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 97 87 76 74 81 97 72 75 81 71 59 81 99 71 63 64 74 88 73 242 7 5 393 2 30 9 6 461 2 64 77 90 116 71 56 73 83 91 62 76 78 84 86 79 92 65 98 95 71 77 ]
C [ 152 165 152 152 147 128 161 147 134 156 167 150 173 131 183 196 183 154 121 70 30 393 3 390 54 55 109 2 394 201 189 140 123 181 194 160 160 144 187 175 160 165 144 159 141 148 145 141 162 150 ]
G [ 136 158 165 155 164 153 135 167 177 177 160 175 137 188 156 121 131 163 216 156 14 60 71 63 390 7 356 9 25 126 138 176 185 163 160 159 162 168 155 154 149 151 158 153 152 178 155 147 162 164 ]
T [ 90 65 82 94 83 97 107 86 83 71 89 69 66 85 73 94 87 70 65 7 424 17 8 20 1 404 4 3 54 84 71 69 51 60 65 83 70 72 71 70 88 75 87 84 90 84 77 92 80 84 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 -0.00 0.01 -0.01 -0.01 0.01 -0.01 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 -0.00 0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.01 0.00 0.01 -0.01 0.01 -0.00 0.01 0.00 -0.01 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.01 0.00 0.01 -0.00 0.01 -0.01 0.01 0.00 -0.01 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.01 0.01 -0.01 -0.01 -0.00 -0.01 0.01 -0.01 -0.01 0.00 -0.00 -0.00 -0.01 -0.01 -0.00 -0.01 -0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 499

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 183

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 124

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 120

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 40

3 profiles found for the same TF (SREBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001137.1 SREBF1 ENCSR000EEO HepG2 Homo sapiens MA0829.3
BP001138.1 SREBF1 ENCSR197DJH MCF-7 Homo sapiens MA0829.3
BP001140.1 SREBF1 ENCSR897MYK A549 Homo sapiens MA0595.1
Showing 3 profiles of page 1 from 1 pages
  • 1 (current)