Detailed information of deep learning profile BP001139.1

This page shows detailed deep learning-derived predictions and motifs for SREBF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SREBF1
Model ID: BP001139.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0829.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36956  
Source: ENCSR815ZDS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 -0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 0.00 0.01 -0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 84 80 92 77 84 90 84 87 75 88 70 71 72 70 83 65 60 51 69 71 84 54 3 4 404 1 20 8 17 424 7 65 70 87 94 73 85 66 69 89 71 83 86 107 97 83 94 82 65 90 ]
C [ 164 162 147 155 178 152 153 158 151 149 154 155 168 162 159 160 163 185 176 138 126 25 9 356 7 390 63 71 60 14 156 216 163 131 121 156 188 137 175 160 177 177 167 135 153 164 155 165 158 136 ]
G [ 150 162 141 145 148 141 159 144 165 160 175 187 144 160 160 194 181 123 140 189 201 394 2 109 55 54 390 3 393 30 70 121 154 183 196 183 131 173 150 167 156 134 147 161 128 147 152 152 165 152 ]
T [ 77 71 95 98 65 92 79 86 84 78 76 62 91 83 73 56 71 116 90 77 64 2 461 6 9 30 2 393 5 7 242 73 88 74 64 63 71 99 81 59 71 81 75 72 97 81 74 76 87 97 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 -0.01 -0.00 -0.01 -0.01 -0.00 -0.00 0.00 -0.01 -0.01 0.01 -0.01 -0.00 -0.01 -0.01 0.01 -0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.01 0.00 0.01 -0.01 0.01 -0.00 0.01 0.00 -0.01 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.01 0.00 0.01 -0.00 0.01 -0.01 0.01 0.00 -0.01 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 0.00 -0.00 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 -0.01 0.01 -0.01 -0.01 0.01 -0.00 -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 499

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 183

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 124

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 120

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 40

3 profiles found for the same TF (SREBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001137.1 SREBF1 ENCSR000EEO HepG2 Homo sapiens MA0829.3
BP001138.1 SREBF1 ENCSR197DJH MCF-7 Homo sapiens MA0829.3
BP001140.1 SREBF1 ENCSR897MYK A549 Homo sapiens MA0595.1
Showing 3 profiles of page 1 from 1 pages
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