Detailed information of deep learning profile BP001138.1

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This page shows detailed deep learning-derived predictions and motifs for SREBF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SREBF1
Model ID: BP001138.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0829.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36956  
Source: ENCSR197DJH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.05 -0.00 -0.00 -0.00 0.00 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.06 0.00 0.06 0.02 0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 0.00 0.00 0.01 -0.00 0.06 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.05 -0.00 -0.00 -0.00 -0.00 0.04 -0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1112 2591 1324 1213 1084 1200 1526 2592 1260 1195 1095 1593 1069 1294 1652 2067 1360 3969 94 30 5679 3 161 211 16 5330 22 702 850 830 2343 1082 1077 2497 1206 1110 1094 1055 1646 2473 1178 2396 1083 1117 2417 1156 1239 1209 1111 1158 ]
C [ 1120 1020 955 1064 2502 2010 1057 1066 1153 1100 1922 1131 1280 1186 1560 647 898 339 58 5653 3 5654 4555 154 184 89 1364 1609 1327 2500 1118 1102 1149 1061 1070 1161 1196 2095 1135 1077 1141 1187 2459 2328 1083 1250 2367 2233 1187 1092 ]
G [ 2459 1149 2511 2467 1076 1090 2196 1172 2394 2468 1081 2106 2429 2288 1034 2286 2703 1494 12 130 49 128 1093 18 5592 118 963 2119 715 975 1136 2454 2496 1153 2368 1113 1029 1142 1956 1084 2424 1189 1082 1137 1185 2283 1109 1184 1119 2450 ]
T [ 1132 1063 1033 1079 1161 1523 1044 993 1016 1060 1725 993 1045 1055 1577 823 862 21 5659 10 92 38 14 5440 31 286 3474 1393 2931 1518 1226 1185 1101 1112 1179 2439 2504 1531 1086 1189 1080 1051 1199 1241 1138 1134 1108 1197 2406 1123 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.01 0.03 -0.00 -0.02 0.05 -0.05 -0.02 -0.01 -0.04 0.05 -0.06 -0.00 0.00 -0.00 0.00 ]
C [ 0.01 0.01 0.00 0.01 0.00 -0.02 0.06 -0.07 0.06 0.03 0.03 0.02 -0.03 0.04 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 0.03 -0.03 0.01 0.03 0.04 0.07 -0.06 0.06 -0.02 -0.00 0.01 0.01 0.01 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 -0.05 0.05 -0.03 -0.01 -0.02 -0.06 0.04 -0.02 -0.00 0.04 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1415

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1287

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 216

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 210

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 194

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 25

CWM

PFM

     

HCWM

3 profiles found for the same TF (SREBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001137.1 SREBF1 ENCSR000EEO HepG2 Homo sapiens MA0829.3
BP001139.1 SREBF1 ENCSR815ZDS K562 Homo sapiens MA0829.3
BP001140.1 SREBF1 ENCSR897MYK A549 Homo sapiens MA0595.1
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