JASPAR - SREBF1 - BP001137.1

This page shows detailed deep learning-derived predictions and motifs for SREBF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	SREBF1
Model ID:	BP001137.1
Cell line/tissue:	HepG2
Class:	Basic helix-loop-helix factors (bHLH)
Family:	bHLH-ZIP
JASPAR ID:	MA0829.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P36956
Source:	ENCSR000EEO
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 730

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.01	-0.00	-0.00	-0.00	-0.00	0.03	-0.00	-0.00	-0.00	0.00	]
C [	0.00	0.00	0.00	0.00	-0.00	0.00	0.01	-0.00	0.01	0.00	0.00	0.00	-0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.01	-0.00	0.00	0.01	0.00	0.01	0.00	0.02	0.00	-0.00	0.00	0.00	0.00	]
T [	0.00	-0.00	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.01	-0.00	0.00	-0.00	]

Frequency matrix

A [	165	121	134	138	158	143	125	105	109	110	117	171	170	96	145	135	163	181	12	14	321	6	24	8	11	700	12	115	138	88	162	126	104	118	108	192	109	91	139	145	172	159	132	125	151	115	117	137	106	123	]
C [	203	263	253	258	212	179	179	295	244	207	244	261	206	217	238	319	180	137	23	390	4	452	128	59	74	2	350	299	197	226	193	201	262	177	240	208	265	245	219	263	202	216	256	268	195	251	226	214	263	266	]
G [	228	218	233	214	240	277	303	231	193	303	253	216	214	229	239	180	293	394	15	297	382	223	573	1	636	21	91	176	197	275	271	295	268	274	240	256	240	233	256	202	227	211	213	213	213	222	262	252	246	231	]
T [	134	128	110	120	120	131	123	99	184	110	116	82	140	188	108	96	94	18	680	29	23	49	5	662	9	7	277	140	198	141	104	108	96	161	142	74	116	161	116	120	129	144	129	124	171	142	125	127	115	110	]

Hypothetical CWM

A [	-0.01	-0.00	-0.00	-0.00	0.01	-0.01	-0.01	0.01	-0.02	-0.01	-0.02	-0.00	0.03	-0.02	-0.00	-0.00	-0.01	0.00	]
C [	0.00	0.01	0.01	0.00	-0.00	-0.00	0.02	-0.01	0.02	0.01	0.02	0.00	-0.01	0.01	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.01	-0.01	0.00	0.02	0.01	0.02	-0.02	0.02	-0.00	-0.00	0.00	0.00	0.01	0.00	]
T [	0.00	-0.00	-0.00	-0.00	-0.01	0.03	-0.00	-0.02	-0.01	-0.02	0.02	-0.01	-0.01	0.01	-0.00	-0.00	-0.00	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 983

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 590

CWM

PFM

HCWM

3 profiles found for the same TF (SREBF1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001138.1	SREBF1	ENCSR197DJH	MCF-7	Homo sapiens	MA0829.3
BP001139.1	SREBF1	ENCSR815ZDS	K562	Homo sapiens	MA0829.3
BP001140.1	SREBF1	ENCSR897MYK	A549	Homo sapiens	MA0595.1