JASPAR - NFYB - BP001119.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for NFYB in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	NFYB
Model ID:	BP001119.1
Cell line/tissue:	WTC11
Class:	Heteromeric CCAAT-binding factors
Family:	Heteromeric CCAAT-binding
JASPAR ID:	MA0502.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P25208
Source:	ENCSR146UIC
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 11194

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.00	-0.00	0.09	0.00	-0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	]
C [	-0.00	0.01	0.01	-0.00	0.00	-0.00	0.00	0.00	-0.00	0.01	0.01	0.00	-0.00	]
G [	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.07	0.08	-0.00	-0.00	0.01	0.00	]
T [	0.00	-0.00	0.01	-0.00	-0.00	0.08	0.07	-0.00	-0.00	0.00	0.01	-0.00	-0.00	]

Frequency matrix

A [	2548	2532	3245	2165	1805	1818	1757	1814	2744	1632	1699	1868	3065	1507	2820	1437	3870	1198	3734	1380	2764	1589	1619	1088	552	63	338	11091	16	154	20	52	845	496	2310	4242	1979	1928	1093	2564	2785	3283	3394	2511	2783	2480	2452	2061	1368	2222	]
C [	3232	2889	3014	3613	4186	3023	2834	2984	3876	4320	5258	4087	3333	4133	3706	5633	2953	5905	3072	2632	3698	4263	4520	1886	7513	3102	2731	4	125	5	43	11	4884	4572	3890	2061	2230	2320	3392	2492	3207	3224	2833	2435	4084	4399	3478	2256	3063	3247	]
G [	2794	3037	3119	2867	2548	2869	4087	3793	2438	3245	2535	2193	2516	3026	2571	1981	2605	2748	2042	4803	3452	3974	865	4272	1912	701	7274	94	49	14	11122	11124	572	2063	3938	3814	2943	3109	2619	2687	3109	3344	2838	3930	2680	2949	2766	3553	3561	3278	]
T [	2620	2736	1816	2549	2655	3484	2516	2603	2136	1997	1702	3046	2280	2528	2097	2143	1766	1343	2346	2379	1280	1368	4190	3948	1217	7328	851	5	11004	11021	9	7	4893	4063	1056	1077	4042	3837	4090	3451	2093	1343	2129	2318	1647	1366	2498	3324	3202	2447	]

Hypothetical CWM

A [	0.00	0.00	0.00	-0.00	-0.05	-0.01	0.09	-0.03	0.01	-0.02	-0.02	-0.00	-0.02	0.01	0.01	0.00	0.00	]
C [	0.01	0.02	0.00	0.02	0.04	0.01	-0.06	0.00	-0.01	0.00	-0.02	0.02	0.02	0.01	0.00	0.01	0.01	]
G [	0.01	0.00	0.01	0.01	0.00	0.03	0.02	-0.03	-0.04	0.07	0.08	-0.01	0.01	0.03	0.02	0.01	0.01	]
T [	-0.00	0.01	0.01	0.00	0.02	-0.00	-0.05	0.08	0.07	-0.05	-0.05	0.02	0.02	-0.02	-0.01	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 92

CWM

PFM

HCWM

4 profiles found for the same TF (NFYB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001116.1	NFYB	ENCSR000DNM	GM12878	Homo sapiens	MA0502.3
BP001117.1	NFYB	ENCSR000DNR	HeLa-S3	Homo sapiens	MA0502.3
BP001118.1	NFYB	ENCSR000EGQ	K562	Homo sapiens	MA0502.3
BP001120.1	NFYB	ENCSR935GZV	HepG2	Homo sapiens	MA0502.3