JASPAR - NFYB - BP001117.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for NFYB in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	NFYB
Model ID:	BP001117.1
Cell line/tissue:	HeLa-S3
Class:	Heteromeric CCAAT-binding factors
Family:	Heteromeric CCAAT-binding
JASPAR ID:	MA0502.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P25208
Source:	ENCSR000DNR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 10695

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	0.12	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.00	]
C [	0.00	0.01	-0.00	0.01	0.01	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.01	0.01	-0.00	-0.00	]
G [	-0.00	-0.00	0.00	-0.00	-0.00	0.02	0.00	-0.00	-0.00	0.08	0.10	-0.00	-0.00	0.01	0.00	]
T [	-0.00	0.00	0.00	0.00	0.02	-0.00	-0.00	0.10	0.10	-0.00	0.00	0.01	0.01	-0.00	-0.00	]

Frequency matrix

A [	2565	2471	2903	2345	1928	2022	1880	1888	2696	1786	1861	1953	2808	1649	2648	1380	3651	1377	3434	1462	2903	1754	1740	1248	690	129	445	10571	34	259	36	54	977	476	2380	4000	2026	2086	1315	2592	2494	3155	3194	2658	2583	2493	2240	2144	1575	2251	]
C [	2963	2818	2801	3284	3540	2720	2680	2879	3361	3875	4458	3573	3089	3565	3290	5379	2726	5201	2797	2576	3084	3706	4185	1909	6631	2975	2679	3	182	9	72	22	4446	4093	3557	1955	2201	2016	3069	2349	2990	2867	2699	2408	3780	3859	3182	2273	2750	2990	]
G [	2710	2856	3049	2607	2575	2735	3584	3265	2368	3111	2510	2219	2397	2899	2482	1868	2407	2641	1985	4503	3229	3675	885	3596	1920	743	6586	111	65	16	10549	10615	581	2004	3659	3603	2771	2982	2529	2535	3027	3162	2815	3324	2560	2831	2721	3143	3354	3114	]
T [	2457	2550	1942	2459	2652	3218	2551	2663	2270	1923	1866	2950	2401	2582	2275	2068	1911	1476	2479	2154	1479	1560	3885	3942	1454	6848	985	10	10414	10411	38	4	4691	4122	1099	1137	3697	3611	3782	3219	2184	1511	1987	2305	1772	1512	2552	3135	3016	2340	]

Hypothetical CWM

A [	-0.00	0.00	-0.00	-0.01	-0.02	0.00	-0.00	-0.00	-0.00	0.01	0.00	0.01	0.00	0.00	-0.05	-0.01	0.12	-0.04	0.01	-0.02	0.00	0.01	-0.02	0.01	0.01	0.01	0.01	]
C [	0.01	0.01	0.02	0.02	0.04	0.01	0.02	0.02	0.01	0.01	0.02	0.02	0.00	0.02	0.05	0.01	-0.08	-0.01	-0.02	0.00	-0.04	0.02	0.03	0.01	0.00	0.01	0.01	]
G [	0.01	0.01	0.01	0.01	0.01	0.01	0.01	0.00	0.01	0.01	0.01	-0.00	0.01	0.01	-0.01	0.03	0.02	-0.04	-0.07	0.08	0.10	-0.02	-0.00	0.03	0.02	0.01	0.01	]
T [	-0.00	-0.00	-0.00	-0.01	-0.02	-0.00	-0.01	0.01	0.00	-0.00	0.01	0.01	0.01	0.01	0.04	0.00	-0.05	0.10	0.10	-0.04	-0.06	0.03	0.03	-0.02	-0.01	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 26

CWM

PFM

HCWM

4 profiles found for the same TF (NFYB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001116.1	NFYB	ENCSR000DNM	GM12878	Homo sapiens	MA0502.3
BP001118.1	NFYB	ENCSR000EGQ	K562	Homo sapiens	MA0502.3
BP001119.1	NFYB	ENCSR146UIC	WTC11	Homo sapiens	MA0502.3
BP001120.1	NFYB	ENCSR935GZV	HepG2	Homo sapiens	MA0502.3