Detailed information of deep learning profile BP001118.1

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This page shows detailed deep learning-derived predictions and motifs for NFYB in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFYB
Model ID: BP001118.1
Cell line/tissue: K562
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
JASPAR ID: MA0502.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P25208  
Source: ENCSR000EGQ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.14 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.01 0.00 0.01 0.01 0.04 0.00 0.02 0.00 0.00 0.00 0.01 0.01 -0.00 0.02 0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.01 0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 0.00 -0.00 0.01 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.11 0.13 -0.00 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.12 0.11 -0.00 -0.00 0.01 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 4351 6831 4967 2591 2680 2471 2624 4733 2473 2696 3847 5645 2018 4481 1738 9977 1736 9682 2009 7151 2336 3144 2019 769 128 550 18910 22 224 30 58 1161 803 3074 8746 2666 2611 1598 5500 5653 7280 8164 5337 5624 4181 3789 2921 2084 4878 2678 ]
C [ 3763 3588 5231 6378 3732 3445 3667 6369 8494 9733 5787 4098 5972 5734 9216 3428 11889 3475 3313 5247 6131 6304 2276 14252 3618 3191 6 288 20 58 19 5782 7948 8961 2488 2621 2768 4192 3011 5658 5412 4213 3119 6936 7308 5667 3008 5463 4703 4076 ]
G [ 4671 5702 3688 3217 4602 8783 7332 3209 4961 3900 2974 3172 4677 3043 3016 3200 3465 2804 9653 4887 8696 1117 9512 2350 790 14308 124 65 23 18931 18974 625 4971 4840 6421 3846 3796 3137 3097 4313 4617 3762 6323 4289 5554 4296 5703 6334 4348 8362 ]
T [ 6271 2935 5170 6870 8042 4357 5433 4745 3128 2727 6448 6141 6389 5798 5086 2451 1966 3095 4081 1771 1893 8491 5249 1685 14520 1007 16 18681 18789 37 5 11488 5334 2181 1401 9923 9881 10129 7448 3432 1747 2917 4277 2207 2013 5304 7424 5175 5127 3940 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.01 -0.03 -0.00 -0.00 -0.00 -0.00 0.01 0.01 0.01 -0.00 -0.00 -0.07 -0.01 0.14 -0.05 0.01 -0.04 -0.01 0.00 -0.03 0.01 0.02 0.01 0.00 -0.00 ]
C [ 0.02 0.02 0.03 0.03 0.07 0.03 0.03 0.02 0.03 0.02 0.03 0.03 0.01 0.03 0.06 0.01 -0.10 0.00 -0.02 0.00 -0.04 0.04 0.04 0.01 0.01 0.02 0.02 0.02 ]
G [ 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.01 0.02 0.03 0.01 0.00 0.02 0.02 -0.01 0.05 0.03 -0.05 -0.08 0.11 0.13 -0.02 0.01 0.05 0.04 0.02 0.02 0.02 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.04 -0.01 -0.01 0.01 0.00 -0.00 0.01 0.01 0.02 0.01 0.05 0.00 -0.06 0.12 0.11 -0.04 -0.07 0.03 0.03 -0.03 -0.01 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 70

CWM

PFM

     

HCWM

4 profiles found for the same TF (NFYB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001116.1 NFYB ENCSR000DNM GM12878 Homo sapiens MA0502.3
BP001117.1 NFYB ENCSR000DNR HeLa-S3 Homo sapiens MA0502.3
BP001119.1 NFYB ENCSR146UIC WTC11 Homo sapiens MA0502.3
BP001120.1 NFYB ENCSR935GZV HepG2 Homo sapiens MA0502.3
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