JASPAR - MEF2A - BP001090.1

This page shows detailed deep learning-derived predictions and motifs for MEF2A in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	MEF2A
Model ID:	BP001090.1
Cell line/tissue:	K562
Class:	MADS box factors
Family:	Regulators of differentiation
JASPAR ID:	MA0052.5
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q02078
Source:	ENCSR000BNV
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 3880

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.00	-0.00	-0.00	0.00	0.04	0.02	0.05	0.04	0.06	-0.00	0.08	0.00	0.00	-0.00	-0.00	-0.00	]
C [	0.00	-0.00	-0.00	-0.00	0.04	0.02	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.04	-0.00	-0.00	-0.00	0.00	]
T [	-0.00	0.00	0.00	0.00	-0.00	0.04	-0.00	0.01	0.00	0.00	0.00	0.07	-0.00	-0.00	-0.00	0.00	-0.00	0.00	]

Frequency matrix

A [	1027	1109	1066	1030	1059	1008	1041	1093	1086	1093	1059	1099	1195	1057	1015	1133	1214	1201	1127	1155	570	378	4	2961	2560	3477	3346	3513	71	3798	578	1484	1346	1007	939	1021	906	1015	1069	975	1039	1065	1038	1028	1053	1023	998	1064	1052	990	]
C [	921	864	889	958	910	918	888	878	923	879	839	912	915	971	987	1044	987	742	648	417	358	2949	1495	352	65	2	35	8	15	3	107	1647	1115	1127	1147	850	875	952	910	896	964	906	951	937	881	939	919	889	925	905	]
G [	861	841	848	856	922	980	1001	899	910	846	880	901	843	893	874	785	798	1002	1137	1102	1594	159	9	122	373	174	53	8	9	77	3070	335	326	577	678	928	1078	948	948	928	879	882	935	878	940	937	957	972	978	982	]
T [	1071	1066	1077	1036	989	974	950	1010	961	1062	1102	968	927	959	1004	918	881	935	968	1206	1358	394	2372	445	882	227	446	351	3785	2	125	414	1093	1169	1116	1081	1021	965	953	1081	998	1027	956	1037	1006	981	1006	955	925	1003	]

Hypothetical CWM

A [	0.00	0.00	0.01	-0.01	-0.01	-0.07	0.04	0.03	0.05	0.04	0.06	-0.00	0.08	0.01	0.02	0.00	0.00	-0.00	-0.00	]
C [	0.01	0.01	0.00	-0.01	0.05	0.04	-0.01	-0.04	-0.07	-0.04	-0.04	-0.04	-0.04	-0.02	0.03	0.01	0.02	0.01	0.01	]
G [	0.01	0.02	0.01	0.03	-0.01	-0.04	-0.03	-0.01	-0.01	-0.04	-0.05	-0.04	0.01	0.05	-0.00	-0.00	0.00	0.01	0.01	]
T [	-0.00	0.00	0.01	0.02	0.00	0.06	0.00	0.03	0.02	0.03	0.02	0.07	-0.06	-0.02	-0.01	0.01	0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3022

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1161

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 229

CWM

PFM

HCWM

3 profiles found for the same TF (MEF2A) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001089.1	MEF2A	ENCSR000BKB	GM12878	Homo sapiens	MA0052.5
BP001091.1	MEF2A	ENCSR000BVC	SK-N-SH	Homo sapiens	MA0052.5
BP001092.1	MEF2A	ENCSR291MJH	HepG2	Homo sapiens	MA0052.5