Detailed information of deep learning profile BP001070.1

This page shows detailed deep learning-derived predictions and motifs for ZSCAN29 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZSCAN29
Model ID: BP001070.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1602.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IWY8  
Source: ENCSR635EXI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.06 -0.00 0.02 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.01 0.00 -0.00 0.02 -0.00 -0.00 0.02 -0.00 0.04 -0.00 -0.00 -0.00 0.01 0.00 0.00 ]
G [ -0.00 -0.00 0.01 -0.00 0.05 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 0.01 0.02 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.04 -0.00 0.04 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

A [ 297 278 274 289 291 313 309 264 305 293 276 233 268 321 291 333 286 248 291 313 188 180 33 8 37 6 1266 34 751 60 398 145 238 162 322 311 303 308 323 307 310 309 225 236 278 244 301 277 260 288 ]
C [ 376 393 366 382 374 359 356 403 371 352 363 420 456 349 376 341 263 304 512 506 319 507 11 36 1198 165 21 929 16 1155 189 85 344 792 523 418 409 344 337 409 407 375 438 405 352 385 360 355 383 338 ]
G [ 368 386 403 363 373 352 372 367 352 369 385 358 306 372 407 413 486 488 286 275 554 257 1268 89 53 35 11 37 540 49 459 992 384 139 207 327 346 378 353 337 328 357 388 390 408 367 347 352 333 377 ]
T [ 272 256 270 279 275 289 276 279 285 299 289 302 283 271 239 226 278 273 224 219 252 369 1 1180 25 1107 15 313 6 49 267 91 347 220 261 257 255 283 300 260 268 272 262 282 275 317 305 329 337 310 ]

Hypothetical CWM

A [ 0.01 -0.00 -0.00 -0.01 0.00 -0.02 0.01 -0.02 0.06 -0.03 0.03 -0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.01 0.00 0.02 -0.03 -0.01 0.02 -0.00 -0.02 0.03 -0.03 0.04 -0.00 -0.01 -0.00 0.02 0.00 0.00 -0.00 -0.00 ]
G [ -0.00 0.00 0.01 -0.00 0.05 -0.01 -0.00 -0.01 -0.01 -0.03 0.03 -0.02 0.02 0.02 0.00 -0.01 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.02 0.04 -0.02 0.04 -0.02 0.02 -0.03 -0.00 -0.01 -0.00 0.01 0.00 0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2510

3 profiles found for the same TF (ZSCAN29) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001067.1 ZSCAN29 ENCSR175SZH K562 Homo sapiens MA1602.2
BP001068.1 ZSCAN29 ENCSR412YGM GM12878 Homo sapiens MA1602.2
BP001069.1 ZSCAN29 ENCSR422VAG HepG2 Homo sapiens MA1602.2
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