Detailed information of deep learning profile BP001069.1

This page shows detailed deep learning-derived predictions and motifs for ZSCAN29 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZSCAN29
Model ID: BP001069.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1602.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IWY8  
Source: ENCSR422VAG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.02 0.00 0.02 0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.01 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.02 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 0.03 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 ]

Frequency matrix

A [ 337 299 338 314 324 313 294 270 307 305 323 283 308 333 334 302 348 229 342 87 292 59 96 233 4 1082 284 1258 4 637 278 308 288 294 294 288 289 323 317 321 333 327 341 296 301 311 310 311 313 324 ]
C [ 360 367 341 369 346 348 374 390 363 365 373 351 342 355 346 361 240 205 422 1008 337 17 424 50 7 87 125 54 1351 171 471 270 246 460 497 379 382 390 369 396 342 366 376 417 385 354 369 368 369 392 ]
G [ 359 395 379 401 372 410 393 383 393 384 369 427 415 352 401 395 467 690 349 60 146 1259 46 971 11 142 874 43 5 338 403 435 559 394 297 362 374 342 392 342 390 391 339 366 335 378 372 398 355 368 ]
T [ 316 311 314 288 330 301 311 329 309 318 307 311 307 332 291 314 317 248 259 217 597 37 806 118 1350 61 89 17 12 226 220 359 279 224 284 343 327 317 294 313 307 288 316 293 351 329 321 295 335 288 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 0.00 -0.01 -0.00 0.00 -0.00 0.00 -0.01 0.02 0.01 0.02 -0.01 0.01 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.01 0.01 -0.01 0.01 -0.01 0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 -0.00 0.02 -0.01 0.02 -0.01 -0.00 0.01 -0.00 -0.01 0.01 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.01 -0.01 0.01 -0.00 0.03 -0.01 0.00 -0.01 0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2479

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2304

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1253

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1019

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 719

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 426

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 386

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 216

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 113

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 101

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 73

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 43

3 profiles found for the same TF (ZSCAN29) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001067.1 ZSCAN29 ENCSR175SZH K562 Homo sapiens MA1602.2
BP001068.1 ZSCAN29 ENCSR412YGM GM12878 Homo sapiens MA1602.2
BP001070.1 ZSCAN29 ENCSR635EXI K562 Homo sapiens MA1602.2
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