Detailed information of deep learning profile BP001070.1

This page shows detailed deep learning-derived predictions and motifs for ZSCAN29 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZSCAN29
Model ID: BP001070.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1602.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8IWY8  
Source: ENCSR635EXI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.04 -0.00 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.02 0.01 -0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 0.05 -0.00 0.01 -0.00 -0.00 ]
G [ 0.00 0.00 0.01 -0.00 -0.00 -0.00 0.04 -0.00 0.02 -0.00 -0.00 0.02 -0.00 0.00 0.01 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.02 -0.00 0.06 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

A [ 310 337 329 305 317 275 282 262 272 268 260 300 283 255 257 261 220 347 91 267 49 6 313 15 1107 25 1180 1 369 252 219 224 273 278 226 239 271 283 302 289 299 285 279 276 289 275 279 270 256 272 ]
C [ 377 333 352 347 367 408 390 388 357 328 337 353 378 346 327 207 139 384 992 459 49 540 37 11 35 53 89 1268 257 554 275 286 488 486 413 407 372 306 358 385 369 352 367 372 352 373 363 403 386 368 ]
G [ 338 383 355 360 385 352 405 438 375 407 409 337 344 409 418 523 792 344 85 189 1155 16 929 21 165 1198 36 11 507 319 506 512 304 263 341 376 349 456 420 363 352 371 403 356 359 374 382 366 393 376 ]
T [ 288 260 277 301 244 278 236 225 309 310 307 323 308 303 311 322 162 238 145 398 60 751 34 1266 6 37 8 33 180 188 313 291 248 286 333 291 321 268 233 276 293 305 264 309 313 291 289 274 278 297 ]

Hypothetical CWM

A [ 0.00 0.00 -0.00 0.00 0.00 0.01 -0.00 -0.01 -0.00 -0.03 0.02 -0.02 0.04 -0.02 0.04 -0.02 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.01 0.00 0.02 0.02 -0.02 0.03 -0.03 -0.01 -0.01 -0.00 -0.01 0.05 -0.00 0.01 0.00 -0.00 ]
G [ -0.00 -0.00 0.00 0.00 0.02 -0.00 -0.01 -0.00 0.04 -0.03 0.03 -0.02 -0.00 0.02 -0.01 -0.03 0.02 0.00 0.01 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.01 0.03 -0.03 0.06 -0.02 0.01 -0.02 0.00 -0.01 -0.00 -0.00 0.01 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2510

3 profiles found for the same TF (ZSCAN29) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001067.1 ZSCAN29 ENCSR175SZH K562 Homo sapiens MA1602.2
BP001068.1 ZSCAN29 ENCSR412YGM GM12878 Homo sapiens MA1602.2
BP001069.1 ZSCAN29 ENCSR422VAG HepG2 Homo sapiens MA1602.2
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