Detailed information of deep learning profile BP001058.1

This page shows detailed deep learning-derived predictions and motifs for ELK1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELK1
Model ID: BP001058.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0028.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19419  
Source: ENCSR000EFU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.05 0.06 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.02 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.04 0.05 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 432 446 474 452 476 456 430 448 420 441 480 415 489 466 527 552 542 395 256 330 1644 7 26 3 3 0 1 13 250 360 336 319 432 429 382 397 419 394 424 429 459 453 402 395 407 433 415 409 448 416 ]
C [ 884 871 844 902 847 866 885 887 858 901 878 854 830 796 830 879 981 756 1004 1399 113 2193 0 0 2555 2559 1 385 1000 847 930 1026 744 741 935 886 799 888 808 839 842 832 778 825 842 835 827 793 813 796 ]
G [ 793 786 771 786 795 860 849 790 843 786 747 858 800 864 857 835 713 1015 731 438 660 128 1 1 0 0 2509 2061 476 715 813 821 969 970 781 831 864 848 863 818 781 850 902 870 790 823 845 852 859 875 ]
T [ 450 456 470 419 441 377 395 434 438 431 454 432 440 433 345 293 323 393 568 392 142 231 2532 2555 1 0 48 100 833 637 480 393 414 419 461 445 477 429 464 473 477 424 477 469 520 468 472 505 439 472 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 0.02 -0.02 0.01 -0.00 -0.01 -0.03 -0.04 -0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 -0.01 0.02 -0.04 -0.01 0.05 0.06 -0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.01 0.01 0.01 -0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.01 0.05 0.03 -0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.01 0.04 0.05 -0.02 -0.04 -0.01 -0.01 0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 158

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 119

5 profiles found for the same TF (ELK1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001056.1 ELK1 ENCSR000DZB GM12878 Homo sapiens UN0494.1
BP001057.1 ELK1 ENCSR000ECI HeLa-S3 Homo sapiens MA0028.3
BP001059.1 ELK1 ENCSR382WLL MCF-7 Homo sapiens MA0028.3
BP001060.1 ELK1 ENCSR664OKA IMR-90 Homo sapiens UN0494.1
BP001061.1 ELK1 ENCSR717QSS HepG2 Homo sapiens MA0028.3
Showing 5 profiles of page 1 from 1 pages
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