Detailed information of deep learning profile BP001061.1

This page shows detailed deep learning-derived predictions and motifs for ELK1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELK1
Model ID: BP001061.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0028.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19419  
Source: ENCSR717QSS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.01 0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.01 0.01 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.01 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 605 636 645 591 618 648 598 638 611 586 615 588 632 654 739 684 691 637 490 553 1727 128 66 62 33 2 3 25 405 569 473 527 581 581 524 632 624 593 585 632 640 631 552 607 584 615 546 552 585 553 ]
C [ 1118 1148 1121 1186 1148 1074 1096 1179 1105 1154 1177 1067 1093 1044 1008 1053 1184 939 1195 1519 297 2347 41 70 3307 3406 3 442 1259 1088 1170 1250 1054 972 1160 1065 986 1083 1041 1097 1089 1135 1119 1072 1081 1047 1119 1058 1130 1109 ]
G [ 1040 1014 1030 1037 1026 1090 1156 1003 1121 1068 968 1213 1095 1124 1127 1118 939 1173 963 669 1052 318 60 33 28 1 3289 2840 743 980 1129 1105 1188 1268 1112 1063 1144 1107 1134 1076 1064 1027 1116 1070 1095 1089 1107 1136 1069 1087 ]
T [ 646 611 613 595 617 597 559 589 572 601 649 541 589 587 535 554 595 660 761 668 333 616 3242 3244 41 0 114 102 1002 772 637 527 586 588 613 649 655 626 649 604 616 616 622 660 649 658 637 663 625 660 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 -0.00 0.00 -0.01 0.00 -0.01 -0.00 0.01 0.02 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.01 -0.00 -0.01 -0.01 -0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 349

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 279

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 267

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 235

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 226

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 184

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 88

5 profiles found for the same TF (ELK1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001056.1 ELK1 ENCSR000DZB GM12878 Homo sapiens UN0494.1
BP001057.1 ELK1 ENCSR000ECI HeLa-S3 Homo sapiens MA0028.3
BP001058.1 ELK1 ENCSR000EFU K562 Homo sapiens MA0028.3
BP001059.1 ELK1 ENCSR382WLL MCF-7 Homo sapiens MA0028.3
BP001060.1 ELK1 ENCSR664OKA IMR-90 Homo sapiens UN0494.1
Showing 5 profiles of page 1 from 1 pages
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