Detailed information of deep learning profile BP001059.1

This page shows detailed deep learning-derived predictions and motifs for ELK1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELK1
Model ID: BP001059.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0028.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19419  
Source: ENCSR382WLL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 -0.00 0.05 0.06 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.05 0.02 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.00 0.04 0.05 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 925 928 950 868 937 916 925 865 846 886 968 892 940 998 1096 978 987 787 508 704 2872 35 136 6 9 1 2 101 559 787 712 716 821 877 812 886 816 807 874 879 931 879 775 844 845 884 842 871 890 860 ]
C [ 1845 1869 1759 1899 1879 1816 1855 1900 1833 1865 1882 1812 1771 1821 1590 1878 2043 1598 2124 2750 492 4318 0 8 5336 5350 0 888 2022 1942 1906 2107 1614 1586 1922 1777 1716 1855 1685 1802 1784 1764 1785 1779 1774 1741 1763 1758 1783 1766 ]
G [ 1646 1635 1724 1689 1617 1739 1729 1666 1746 1638 1584 1754 1733 1629 1820 1732 1485 2027 1526 1006 1586 346 18 5 2 0 5084 4059 1164 1300 1593 1729 1961 1973 1668 1745 1830 1750 1801 1723 1658 1748 1824 1735 1706 1738 1763 1744 1727 1736 ]
T [ 935 919 918 895 918 880 842 920 926 962 917 893 907 903 845 763 836 939 1193 891 401 652 5197 5332 4 0 265 303 1606 1322 1140 799 955 915 949 943 989 939 991 947 978 960 967 993 1026 988 983 978 951 989 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.00 -0.00 0.02 -0.02 0.01 -0.01 -0.01 -0.03 -0.03 -0.02 -0.00 -0.00 0.00 -0.01 ]
C [ 0.00 0.01 0.00 0.01 -0.01 0.02 -0.03 -0.02 0.05 0.06 -0.03 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.02 0.05 0.02 -0.01 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.01 0.04 0.05 -0.02 -0.04 -0.00 -0.01 0.01 0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 425

5 profiles found for the same TF (ELK1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001056.1 ELK1 ENCSR000DZB GM12878 Homo sapiens UN0494.1
BP001057.1 ELK1 ENCSR000ECI HeLa-S3 Homo sapiens MA0028.3
BP001058.1 ELK1 ENCSR000EFU K562 Homo sapiens MA0028.3
BP001060.1 ELK1 ENCSR664OKA IMR-90 Homo sapiens UN0494.1
BP001061.1 ELK1 ENCSR717QSS HepG2 Homo sapiens MA0028.3
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