Detailed information of deep learning profile BP001057.1

This page shows detailed deep learning-derived predictions and motifs for ELK1 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELK1
Model ID: BP001057.1
Cell line/tissue: HeLa-S3
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0028.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19419  
Source: ENCSR000ECI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.04 0.03 0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.04 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.04 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 701 680 721 719 730 743 712 711 701 731 673 698 684 710 703 661 654 671 574 780 980 1174 171 234 0 0 3781 3724 375 213 631 910 664 584 548 593 674 677 693 718 662 684 679 627 658 650 645 668 652 703 ]
C [ 1252 1235 1236 1206 1212 1201 1205 1261 1206 1167 1202 1293 1221 1309 1230 1160 1442 1400 1208 1118 1077 764 3044 3551 0 0 3 6 217 1075 672 1017 1441 988 1199 1280 1174 1144 1191 1085 1137 1218 1128 1194 1208 1160 1172 1201 1110 1153 ]
G [ 1235 1227 1205 1237 1219 1221 1259 1222 1219 1222 1255 1153 1296 1177 1260 1400 1064 1139 1516 1381 1176 1459 544 0 3786 3784 1 1 3190 269 2000 1502 1089 1493 1300 1131 1234 1289 1241 1283 1325 1246 1340 1321 1278 1274 1317 1240 1342 1277 ]
T [ 598 644 624 624 625 621 610 592 660 666 656 642 585 590 593 565 626 576 488 507 553 389 27 1 0 2 1 55 4 2229 483 357 592 721 739 782 704 676 661 700 662 638 639 644 642 702 652 677 682 653 ]

Hypothetical CWM

A [ -0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.03 -0.03 0.04 0.03 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.04 -0.02 -0.02 -0.02 -0.01 0.00 0.01 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.02 0.05 0.04 -0.01 -0.02 0.02 -0.00 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.02 -0.03 -0.02 -0.01 -0.01 0.00 -0.03 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 88

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 27

5 profiles found for the same TF (ELK1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001056.1 ELK1 ENCSR000DZB GM12878 Homo sapiens UN0494.1
BP001058.1 ELK1 ENCSR000EFU K562 Homo sapiens MA0028.3
BP001059.1 ELK1 ENCSR382WLL MCF-7 Homo sapiens MA0028.3
BP001060.1 ELK1 ENCSR664OKA IMR-90 Homo sapiens UN0494.1
BP001061.1 ELK1 ENCSR717QSS HepG2 Homo sapiens MA0028.3
Showing 5 profiles of page 1 from 1 pages
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