Detailed information of deep learning profile BP001026.1

This page shows detailed deep learning-derived predictions and motifs for ZKSCAN1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZKSCAN1
Model ID: BP001026.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1585.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17029  
Source: ENCSR449UFF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 0.00 -0.00 0.02 -0.00 0.01 -0.00 0.07 -0.00 -0.00 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 -0.00 0.03 -0.00 0.06 -0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 -0.00 0.02 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.05 0.00 0.00 0.04 0.07 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.09 -0.00 0.00 -0.00 0.01 -0.00 0.00 -0.00 ]

Frequency matrix

A [ 258 258 226 208 216 386 270 290 445 240 524 308 195 223 164 126 162 270 163 62 912 4 919 4 1158 8 2 1071 30 4 97 194 72 147 94 639 457 210 541 549 516 187 389 212 256 240 272 253 259 273 ]
C [ 321 288 400 452 345 228 248 405 252 467 216 204 201 194 622 649 285 90 51 999 34 1135 83 537 1 7 0 23 4 3 245 340 712 138 660 158 156 259 191 222 176 269 196 260 222 220 179 300 236 264 ]
G [ 297 309 257 190 202 277 431 231 231 236 213 516 290 586 176 158 169 595 897 22 204 14 94 25 4 1143 0 69 1096 1148 150 558 104 148 103 136 375 190 211 196 273 226 330 264 258 294 468 220 266 373 ]
T [ 288 309 281 314 401 273 215 238 236 221 211 136 478 161 202 231 548 209 53 81 14 11 68 598 1 6 1162 1 34 9 672 72 276 731 307 231 176 505 221 197 199 482 249 428 428 410 245 391 403 254 ]

Hypothetical CWM

A [ 0.01 0.01 0.00 0.01 0.00 0.02 -0.02 0.01 -0.04 0.07 -0.03 -0.02 0.05 -0.02 -0.03 -0.01 0.00 -0.01 0.01 ]
C [ -0.00 0.01 0.01 -0.00 0.04 -0.02 0.06 0.00 0.03 -0.01 0.01 -0.03 0.02 0.00 -0.02 0.02 0.02 0.01 -0.01 ]
G [ 0.01 0.00 0.00 0.02 -0.02 0.04 -0.01 0.02 -0.01 -0.03 0.05 -0.03 0.01 0.04 0.07 0.00 0.00 0.01 0.02 ]
T [ -0.00 0.00 0.01 -0.00 -0.00 -0.02 -0.02 -0.01 0.03 -0.02 -0.03 0.09 -0.06 -0.00 -0.01 0.01 -0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 287

3 profiles found for the same TF (ZKSCAN1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001024.1 ZKSCAN1 ENCSR000ECJ HeLa-S3 Homo sapiens MA1585.2
BP001025.1 ZKSCAN1 ENCSR157CAU HepG2 Homo sapiens MA1585.2
BP001027.1 ZKSCAN1 ENCSR882ERE K562 Homo sapiens MA1585.2
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