JASPAR - ZKSCAN1 - BP001025.1

This page shows detailed deep learning-derived predictions and motifs for ZKSCAN1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZKSCAN1
Model ID:	BP001025.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1585.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17029
Source:	ENCSR157CAU
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 4429

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	-0.00	0.02	-0.00	0.01	-0.00	0.10	-0.00	-0.00	0.05	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	]
C [	0.00	-0.00	0.00	-0.00	0.04	-0.00	0.09	-0.00	0.02	0.00	0.00	0.00	0.00	0.00	-0.00	0.00	0.01	0.01	-0.00	]
G [	0.00	0.00	-0.00	0.02	-0.00	0.01	-0.00	0.00	-0.00	-0.00	0.08	-0.00	0.00	0.05	0.11	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.12	-0.00	0.00	-0.00	0.01	-0.00	0.00	0.00	]

Frequency matrix

A [	1158	951	808	956	1522	1137	1142	1745	946	1861	1098	783	895	647	595	687	1125	718	337	3422	16	3442	36	4358	44	6	3557	317	35	457	896	408	654	440	2357	1767	856	2135	2192	2012	807	1528	817	912	963	1113	913	952	1151	1648	]
C [	1035	1470	1650	1185	867	875	1402	1024	1600	849	749	839	780	2211	2293	913	352	289	3571	187	4311	275	1923	5	62	18	258	36	11	899	1405	2513	506	2388	561	528	845	699	757	662	887	700	988	885	795	705	1108	820	881	889	]
G [	1209	944	814	786	957	1618	935	802	877	863	1988	1005	1987	728	601	735	2121	3126	136	689	43	330	144	29	4288	9	589	3793	4349	632	1794	342	638	441	566	1328	764	717	721	890	797	1293	879	839	1014	1629	855	961	1421	917	]
T [	1027	1064	1157	1502	1083	799	950	858	1006	856	594	1802	767	843	940	2094	831	296	385	131	59	382	2326	37	35	4396	25	283	34	2441	334	1166	2631	1160	945	806	1964	878	759	865	1938	908	1745	1793	1657	982	1553	1696	976	975	]

Hypothetical CWM

A [	0.01	0.01	0.01	0.01	0.01	0.03	-0.01	0.01	-0.06	0.10	-0.02	-0.04	0.05	0.00	-0.03	-0.01	0.00	-0.01	0.02	-0.00	]
C [	0.01	0.01	0.01	0.00	0.05	0.00	0.09	0.01	0.06	-0.02	0.03	-0.01	0.04	0.00	-0.03	0.03	0.04	0.02	-0.01	0.01	]
G [	0.02	0.02	0.01	0.03	-0.01	0.06	-0.01	0.03	-0.00	-0.01	0.08	-0.04	0.03	0.06	0.11	0.01	0.02	0.02	0.03	0.00	]
T [	0.01	0.00	0.02	0.00	0.01	-0.03	-0.03	0.00	0.06	-0.04	-0.02	0.12	-0.06	-0.00	-0.00	0.02	-0.00	0.01	0.01	0.02	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 236

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 141

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 34

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 22

CWM

PFM

HCWM

3 profiles found for the same TF (ZKSCAN1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001024.1	ZKSCAN1	ENCSR000ECJ	HeLa-S3	Homo sapiens	MA1585.2
BP001026.1	ZKSCAN1	ENCSR449UFF	MCF-7	Homo sapiens	MA1585.2
BP001027.1	ZKSCAN1	ENCSR882ERE	K562	Homo sapiens	MA1585.2