JASPAR - ZKSCAN1 - BP001025.1

This page shows detailed deep learning-derived predictions and motifs for ZKSCAN1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZKSCAN1
Model ID:	BP001025.1
Cell line/tissue:	HepG2
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1585.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17029
Source:	ENCSR157CAU
Model:	BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 4429

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.01	-0.00	0.00	-0.00	0.12	-0.00	-0.00	0.03	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	0.11	0.05	0.00	-0.00	0.08	-0.00	-0.00	0.00	-0.00	0.01	-0.00	0.02	-0.00	0.00	0.00	]
G [	-0.00	0.01	0.01	0.00	-0.00	0.00	0.00	0.00	0.00	0.00	0.02	-0.00	0.09	-0.00	0.04	-0.00	0.00	-0.00	0.00	]
T [	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.05	-0.00	-0.00	0.10	-0.00	0.01	-0.00	0.02	-0.00	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	975	976	1696	1553	982	1657	1793	1745	908	1938	865	759	878	1964	806	945	1160	2631	1166	334	2441	34	283	25	4396	35	37	2326	382	59	131	385	296	831	2094	940	843	767	1802	594	856	1006	858	950	799	1083	1502	1157	1064	1027	]
C [	917	1421	961	855	1629	1014	839	879	1293	797	890	721	717	764	1328	566	441	638	342	1794	632	4349	3793	589	9	4288	29	144	330	43	689	136	3126	2121	735	601	728	1987	1005	1988	863	877	802	935	1618	957	786	814	944	1209	]
G [	889	881	820	1108	705	795	885	988	700	887	662	757	699	845	528	561	2388	506	2513	1405	899	11	36	258	18	62	5	1923	275	4311	187	3571	289	352	913	2293	2211	780	839	749	849	1600	1024	1402	875	867	1185	1650	1470	1035	]
T [	1648	1151	952	913	1113	963	912	817	1528	807	2012	2192	2135	856	1767	2357	440	654	408	896	457	35	317	3557	6	44	4358	36	3442	16	3422	337	718	1125	687	595	647	895	783	1098	1861	946	1745	1142	1137	1522	956	808	951	1158	]

Hypothetical CWM

A [	0.02	0.01	0.01	-0.00	0.02	-0.00	-0.00	-0.06	0.12	-0.02	-0.04	0.06	0.00	-0.03	-0.03	0.01	0.00	0.02	0.00	0.01	]
C [	0.00	0.03	0.02	0.02	0.01	0.11	0.06	0.03	-0.04	0.08	-0.01	-0.00	0.03	-0.01	0.06	-0.01	0.03	0.01	0.02	0.02	]
G [	0.01	-0.01	0.02	0.04	0.03	-0.03	0.00	0.04	-0.01	0.03	-0.02	0.06	0.01	0.09	0.00	0.05	0.00	0.01	0.01	0.01	]
T [	-0.00	0.02	-0.01	0.00	-0.01	-0.03	0.00	0.05	-0.04	-0.02	0.10	-0.06	0.01	-0.01	0.03	0.01	0.01	0.01	0.01	0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1116

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 236

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 141

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 34

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 22

CWM

PFM

HCWM

3 profiles found for the same TF (ZKSCAN1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001024.1	ZKSCAN1	ENCSR000ECJ	HeLa-S3	Homo sapiens	MA1585.2
BP001026.1	ZKSCAN1	ENCSR449UFF	MCF-7	Homo sapiens	MA1585.2
BP001027.1	ZKSCAN1	ENCSR882ERE	K562	Homo sapiens	MA1585.2