JASPAR - ZKSCAN1 - BP001024.1

This page shows detailed deep learning-derived predictions and motifs for ZKSCAN1 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	ZKSCAN1
Model ID:	BP001024.1
Cell line/tissue:	HeLa-S3
Class:	C2H2 zinc finger factors
Family:	More than 3 adjacent zinc fingers
JASPAR ID:	MA1585.2
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17029
Source:	ENCSR000ECJ
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 1896

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	0.00	-0.00	0.02	0.00	0.01	-0.00	0.10	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	]
C [	0.00	-0.00	0.00	-0.00	0.04	-0.00	0.09	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.01	-0.00	]
G [	0.00	0.00	0.00	0.02	0.00	0.01	-0.00	0.00	-0.00	-0.00	0.07	0.00	0.00	0.04	0.10	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.11	-0.00	-0.00	0.00	0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	409	436	405	335	386	586	476	436	653	417	771	476	338	425	300	238	320	472	319	133	1390	7	1410	9	1876	10	1	1486	113	6	225	339	150	269	165	936	718	397	829	812	782	332	591	357	394	414	437	399	416	498	]
C [	510	515	606	675	496	408	419	610	460	689	413	353	364	314	940	970	423	210	103	1568	82	1851	158	924	9	31	7	112	28	7	421	615	1102	266	1054	283	301	409	342	404	342	448	335	464	439	396	346	518	444	420	]
G [	486	489	423	412	375	425	671	437	392	410	381	788	483	856	317	279	333	853	1325	64	363	15	173	63	9	1843	5	292	1638	1865	285	780	142	307	201	254	546	385	357	355	452	398	578	451	409	466	684	418	407	586	]
T [	491	456	462	474	639	477	330	413	391	380	331	279	711	301	339	409	820	361	149	131	61	23	155	900	2	12	1883	6	117	18	965	162	502	1054	476	423	331	705	368	325	320	718	392	624	654	620	429	561	629	392	]

Hypothetical CWM

A [	-0.00	0.00	0.00	0.01	0.00	0.03	-0.03	0.01	-0.06	0.10	-0.03	-0.06	0.05	-0.01	-0.04	-0.01	0.00	-0.01	0.00	]
C [	0.01	0.00	0.01	-0.01	0.05	-0.02	0.09	0.01	0.04	-0.01	0.01	-0.03	0.02	0.00	-0.03	0.02	0.03	0.02	-0.00	]
G [	0.01	0.01	0.00	0.03	-0.02	0.05	-0.03	0.03	-0.02	-0.04	0.07	-0.03	0.02	0.05	0.10	-0.00	0.00	0.01	0.02	]
T [	0.00	-0.00	0.01	0.00	-0.00	-0.04	-0.03	-0.02	0.05	-0.05	-0.04	0.11	-0.07	-0.01	-0.00	0.01	-0.01	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 120

CWM

PFM

HCWM

3 profiles found for the same TF (ZKSCAN1) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP001025.1	ZKSCAN1	ENCSR157CAU	HepG2	Homo sapiens	MA1585.2
BP001026.1	ZKSCAN1	ENCSR449UFF	MCF-7	Homo sapiens	MA1585.2
BP001027.1	ZKSCAN1	ENCSR882ERE	K562	Homo sapiens	MA1585.2