Detailed information of deep learning profile BP001023.1

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This page shows detailed deep learning-derived predictions and motifs for STAT3 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: STAT3
Model ID: BP001023.1
Cell line/tissue: HeLa-S3
Class: STAT domain factors
Family: STAT factors
JASPAR ID: MA0144.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40763  
Source: ENCSR000EDC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.03 0.03 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 0.02 0.04 0.01 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.03 0.03 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.03 0.03 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1019 964 1003 1010 1024 1013 1044 1024 1061 998 1064 1072 1006 954 922 1087 936 981 795 817 1495 849 91 107 1119 10 833 944 66 2972 3504 1423 763 749 1240 850 935 1033 979 1030 1067 1040 980 964 980 1009 974 1010 1052 1047 ]
C [ 838 794 810 824 823 819 831 804 790 834 832 788 794 811 919 837 972 823 895 1152 662 1022 68 13 2244 3435 1124 24 14 557 44 386 669 862 759 968 928 879 828 795 841 863 814 816 824 813 868 799 813 797 ]
G [ 789 846 846 828 816 811 825 856 816 847 850 809 885 777 900 828 831 925 766 895 798 565 41 299 84 9 386 2648 3308 33 31 1096 693 1205 853 838 904 831 889 882 838 776 844 866 850 841 827 816 815 794 ]
T [ 1022 1064 1009 1006 1005 1025 968 984 1001 989 922 999 983 1126 927 916 929 939 1212 804 713 1232 3468 3249 221 214 1325 52 280 106 89 763 1543 852 816 1012 901 925 972 961 922 989 1030 1022 1014 1005 999 1043 988 1030 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 -0.01 -0.01 0.01 -0.03 -0.01 0.00 -0.02 0.03 0.03 0.01 -0.01 -0.00 0.00 ]
C [ 0.01 0.01 0.00 0.00 -0.02 -0.05 0.03 0.05 0.02 -0.02 -0.02 0.01 -0.01 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.01 0.01 -0.02 -0.02 0.02 0.05 0.03 -0.05 -0.02 0.00 -0.00 0.01 0.01 ]
T [ 0.00 -0.00 -0.01 0.01 0.03 0.04 -0.01 0.01 -0.01 -0.03 0.01 -0.01 -0.01 -0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8444

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4896

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2641

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1723

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 729

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 22

CWM

PFM

     

HCWM

3 profiles found for the same TF (STAT3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001020.1 STAT3 ENCSR000DOQ MCF 10A Homo sapiens MA0144.3
BP001021.1 STAT3 ENCSR000DOZ MCF 10A Homo sapiens MA0144.3
BP001022.1 STAT3 ENCSR000DPB MCF 10A Homo sapiens MA0144.3
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