Detailed information of deep learning profile BP001021.1

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This page shows detailed deep learning-derived predictions and motifs for STAT3 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: STAT3
Model ID: BP001021.1
Cell line/tissue: MCF 10A
Class: STAT domain factors
Family: STAT factors
JASPAR ID: MA0144.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40763  
Source: ENCSR000DOZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.03 0.05 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 -0.00 0.00 0.00 0.00 0.05 0.08 0.03 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 -0.00 0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.07 0.07 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 748 714 749 736 699 792 793 768 812 794 811 749 716 685 699 788 744 732 617 646 1152 518 12 11 226 0 329 2641 121 2073 2646 1006 647 636 865 670 728 710 710 759 731 781 761 745 690 737 714 791 780 766 ]
C [ 666 694 705 726 763 693 669 663 702 690 678 652 681 801 791 741 798 696 807 992 577 760 2 0 2626 2854 2248 107 39 709 129 522 715 792 728 845 664 671 731 765 828 760 676 705 741 715 803 722 683 692 ]
G [ 677 658 653 649 662 672 725 730 665 656 673 719 751 699 695 768 741 822 686 698 620 382 2 95 21 1 195 18 2425 22 42 945 541 924 713 699 811 748 778 669 620 616 702 690 741 685 634 652 665 694 ]
T [ 815 840 799 795 782 749 719 745 727 766 744 786 758 721 721 609 623 656 796 570 557 1246 2890 2800 33 51 134 140 321 102 89 433 1003 554 600 692 703 777 687 713 727 749 767 766 734 769 755 741 778 754 ]

Hypothetical CWM

   
A [ -0.01 -0.01 0.01 -0.01 -0.03 -0.02 0.01 -0.06 -0.01 0.00 -0.02 0.04 0.05 0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.02 0.00 0.01 -0.04 -0.08 0.05 0.08 0.04 -0.01 -0.02 0.02 -0.01 0.00 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 -0.00 -0.02 0.01 -0.01 -0.00 0.04 0.09 0.06 -0.06 -0.04 0.01 0.00 0.02 0.01 ]
T [ -0.00 -0.01 -0.01 0.01 0.07 0.07 -0.03 0.00 -0.03 -0.06 -0.00 -0.02 -0.02 -0.01 0.00 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5767

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5398

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4920

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 270

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 251

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 224

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 94

CWM

PFM

     

HCWM

3 profiles found for the same TF (STAT3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001020.1 STAT3 ENCSR000DOQ MCF 10A Homo sapiens MA0144.3
BP001022.1 STAT3 ENCSR000DPB MCF 10A Homo sapiens MA0144.3
BP001023.1 STAT3 ENCSR000EDC HeLa-S3 Homo sapiens MA0144.3
Showing 3 profiles of page 1 from 1 pages
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