Detailed information of deep learning profile BP001022.1

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This page shows detailed deep learning-derived predictions and motifs for STAT3 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: STAT3
Model ID: BP001022.1
Cell line/tissue: MCF 10A
Class: STAT domain factors
Family: STAT factors
JASPAR ID: MA0144.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40763  
Source: ENCSR000DPB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.01 -0.00 -0.00 0.03 0.05 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 -0.00 0.00 -0.00 0.00 0.06 0.10 0.02 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.03 -0.00 -0.00 0.00 0.00 0.01 0.00 ]
T [ 0.00 -0.00 -0.00 0.01 0.08 0.07 0.00 -0.00 -0.01 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2709 2576 2638 2532 2655 2552 2653 2649 2624 2722 2790 2695 2622 2438 2499 2401 2574 2628 2491 2173 2165 4217 2006 72 62 912 22 2099 2565 1204 5585 7302 2872 2291 2306 2654 2373 2681 2487 2494 2692 2679 2685 2692 2635 2514 2473 2525 2661 2613 ]
C [ 2500 2498 2476 2569 2619 2604 2568 2485 2538 2459 2500 2562 2304 2507 2739 2868 2725 2816 2744 2913 3447 1973 2786 20 20 9117 9945 4030 238 898 3238 1046 2024 2587 2783 2531 2800 2406 2434 2533 2504 2742 2598 2502 2572 2616 2629 2628 2494 2588 ]
G [ 2351 2434 2308 2379 2279 2328 2547 2647 2559 2454 2409 2297 2507 2699 2318 2473 2511 2423 2764 2328 2435 2214 1179 34 260 40 13 857 7163 5364 157 721 3111 2051 2920 2638 2457 2710 2718 2609 2445 2252 2150 2374 2327 2340 2404 2415 2411 2421 ]
T [ 2686 2738 2824 2766 2693 2762 2478 2465 2525 2611 2547 2692 2813 2602 2690 2504 2436 2379 2247 2832 2199 1842 4275 10120 9904 177 266 3260 280 2780 1266 1177 2239 3317 2237 2423 2616 2449 2607 2610 2605 2573 2813 2678 2712 2776 2740 2678 2680 2624 ]

Hypothetical CWM

   
A [ -0.01 -0.01 0.02 -0.00 -0.02 -0.02 0.02 -0.06 -0.02 0.00 -0.02 0.06 0.06 0.01 -0.01 -0.00 -0.00 ]
C [ 0.02 0.02 -0.00 0.01 -0.04 -0.08 0.07 0.10 0.05 -0.01 -0.03 0.02 -0.01 0.00 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 -0.00 -0.02 0.01 -0.04 -0.01 0.05 0.10 0.05 -0.08 -0.03 0.01 0.01 0.02 0.02 ]
T [ -0.00 -0.01 -0.01 0.02 0.08 0.07 -0.03 0.00 -0.02 -0.05 0.01 -0.01 -0.02 -0.01 0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 12878

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 7438

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 310

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 264

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 148

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 26

CWM

PFM

     

HCWM

3 profiles found for the same TF (STAT3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001020.1 STAT3 ENCSR000DOQ MCF 10A Homo sapiens MA0144.3
BP001021.1 STAT3 ENCSR000DOZ MCF 10A Homo sapiens MA0144.3
BP001023.1 STAT3 ENCSR000EDC HeLa-S3 Homo sapiens MA0144.3
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