Detailed information of deep learning profile BP001023.1

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This page shows detailed deep learning-derived predictions and motifs for STAT3 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: STAT3
Model ID: BP001023.1
Cell line/tissue: HeLa-S3
Class: STAT domain factors
Family: STAT factors
JASPAR ID: MA0144.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P40763  
Source: ENCSR000EDC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.03 0.03 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.03 0.03 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.01 0.04 0.02 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.03 0.03 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1030 988 1043 999 1005 1014 1022 1030 989 922 961 972 925 901 1012 816 852 1543 763 89 106 280 52 1325 214 221 3249 3468 1232 713 804 1212 939 929 916 927 1126 983 999 922 989 1001 984 968 1025 1005 1006 1009 1064 1022 ]
C [ 794 815 816 827 841 850 866 844 776 838 882 889 831 904 838 853 1205 693 1096 31 33 3308 2648 386 9 84 299 41 565 798 895 766 925 831 828 900 777 885 809 850 847 816 856 825 811 816 828 846 846 789 ]
G [ 797 813 799 868 813 824 816 814 863 841 795 828 879 928 968 759 862 669 386 44 557 14 24 1124 3435 2244 13 68 1022 662 1152 895 823 972 837 919 811 794 788 832 834 790 804 831 819 823 824 810 794 838 ]
T [ 1047 1052 1010 974 1009 980 964 980 1040 1067 1030 979 1033 935 850 1240 749 763 1423 3504 2972 66 944 833 10 1119 107 91 849 1495 817 795 981 936 1087 922 954 1006 1072 1064 998 1061 1024 1044 1013 1024 1010 1003 964 1019 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 -0.00 -0.01 -0.01 0.01 -0.03 -0.01 0.01 -0.01 0.04 0.03 0.01 -0.01 -0.00 0.00 ]
C [ 0.01 0.01 -0.00 0.00 -0.02 -0.05 0.03 0.05 0.02 -0.02 -0.02 0.01 -0.01 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 -0.01 0.01 -0.02 -0.02 0.02 0.05 0.03 -0.05 -0.02 0.00 0.00 0.01 0.01 ]
T [ 0.00 -0.00 -0.01 0.01 0.03 0.03 -0.02 0.00 -0.01 -0.03 0.01 -0.01 -0.01 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8444

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4896

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2641

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1723

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 729

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 22

CWM

PFM

     

HCWM

3 profiles found for the same TF (STAT3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001020.1 STAT3 ENCSR000DOQ MCF 10A Homo sapiens MA0144.3
BP001021.1 STAT3 ENCSR000DOZ MCF 10A Homo sapiens MA0144.3
BP001022.1 STAT3 ENCSR000DPB MCF 10A Homo sapiens MA0144.3
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